C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif, single stranded interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000076067 RBMS2 9606 + 12:56521929-56596196 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262031 RBMS2-001 56521929-56596196 protein_coding
  ENST00000542360 RBMS2-003 56521999-56589595 protein_coding
  ENST00000549945 RBMS2-007 56521995-56571716 processed_transcript
  ENST00000550726 RBMS2-004 56521999-56589503 protein_coding
  ENST00000551369 RBMS2-008 56521989-56571751 nonsense_mediated_decay
  ENST00000552228 RBMS2-009 56571698-56581655 processed_transcript
  ENST00000552247 RBMS2-006 56521958-56589503 protein_coding
  ENST00000552916 RBMS2-002 56521990-56589652 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000262031
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000262031 19.332±0.00 1.171±0.00 1.574±0.98 4.256±0.00 1.658±0.00 0.890±0.00 4.253±0.00 8.250±0.00 0.885±0.52 4.632±1.75 9.539±0.00 4.527±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS RNA binding
GO:0005634 IEA nucleus
GO:0006396 TAS RNA processing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044179 rbms2a RNA binding motif, single stranded interacting protein 2a protein_coding Danio_rerio
ENSDARG00000056150 rbms2b RNA binding motif, single stranded interacting protein 2b protein_coding Danio_rerio
ENSMUSG00000040043 Rbms2 RNA binding motif, single stranded interacting protein 2 protein_coding Mus_musculus

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