C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 13A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000076513 ANKRD13A 9606 + 12:109999186-110039763 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261739 ANKRD13A-001 109999523-110039763 protein_coding
  ENST00000546476 ANKRD13A-011 110023619-110029604 retained_intron
  ENST00000547419 ANKRD13A-008 110028558-110037673 protein_coding
  ENST00000547639 ANKRD13A-006 110018384-110030756 protein_coding
  ENST00000549826 ANKRD13A-009 110028947-110036329 retained_intron
  ENST00000550404 ANKRD13A-002 109999430-110022464 processed_transcript
  ENST00000551491 ANKRD13A-010 110029551-110037652 protein_coding
  ENST00000553025 ANKRD13A-004 109999186-110030700 nonsense_mediated_decay
  ENST00000553246 ANKRD13A-005 110036215-110038006 retained_intron
  ENST00000553251 ANKRD13A-007 110027899-110039428 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261739ENST00000546476ENST00000547639
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261739 2.612±0.00 10.671±0.00 N/A 7.791±0.00 3.620±1.80 5.398±0.00 3.217±2.28 3.119±0.00 7.041±0.00 6.482±2.85 2.332±0.00 6.262±1.25 4.488±1.55 17.385±4.60
ENST00000546476 N/A N/A 6.332±0.00 N/A 7.503±0.00 6.298±0.00 2.436±0.00 N/A 11.888±0.00 8.737±0.00 N/A 9.723±2.72 12.751±0.00 27.008±0.00
ENST00000547639 N/A N/A 3.618±0.00 N/A N/A 5.254±0.00 N/A N/A 7.363±0.00 7.445±0.00 N/A 8.273±0.00 19.770±0.00 38.585±16.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GH CIL_0001GH_0002 CGP 12:109929792-110039763

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061901 ankrd13a ankyrin repeat domain 13A protein_coding Danio_rerio
ENSMUSG00000041870 Ankrd13a ankyrin repeat domain 13a protein_coding Mus_musculus

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