C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061915-ENSDARG00000061901 CGP 7955 5:21669383-21736272
GeneTranscriptPositionBiotype
ENSDARG00000061901 (ankrd13a)
ankyrin repeat domain 13A 		ENSDART00000088819 (ankrd13a-001) 21716684-21736272 protein_coding
ENSDARG00000061915 (git2a)
G protein-coupled receptor kinase interactor 2a 		ENSDART00000088881 (git2a-001) 21669383-21715949 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001GH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139436-ENSG00000076513 CGP 9606 12:109929792-110039763
GeneTranscriptPositionBiotype
ENSG00000076513 (ANKRD13A)
ankyrin repeat domain 13A 		ENST00000261739 (ANKRD13A-001) 109999523-110039763 protein_coding
ENST00000546476 (ANKRD13A-011) 110023619-110029604 retained_intron
ENST00000547419 (ANKRD13A-008) 110028558-110037673 protein_coding
ENST00000547639 (ANKRD13A-006) 110018384-110030756 protein_coding
ENST00000549826 (ANKRD13A-009) 110028947-110036329 retained_intron
ENST00000550404 (ANKRD13A-002) 109999430-110022464 processed_transcript
ENST00000551491 (ANKRD13A-010) 110029551-110037652 protein_coding
ENST00000553025 (ANKRD13A-004) 109999186-110030700 nonsense_mediated_decay
ENST00000553246 (ANKRD13A-005) 110036215-110038006 retained_intron
ENST00000553251 (ANKRD13A-007) 110027899-110039428 retained_intron
ENSG00000139436 (GIT2)
G protein-coupled receptor kinase interacting ArfGAP 2 		ENST00000320063 (GIT2-007) 109948062-109996291 protein_coding
ENST00000354574 (GIT2-201) 109929802-109996389 protein_coding
ENST00000355312 (GIT2-001) 109929792-109996224 protein_coding
ENST00000361006 (GIT2-004) 109929804-109996304 protein_coding
ENST00000457474 (GIT2-010) 109929804-109996295 protein_coding
ENST00000546613 (GIT2-017) 109933096-109939022 processed_transcript
ENST00000547267 (GIT2-014) 109983608-109992088 retained_intron
ENST00000547694 (GIT2-016) 109952680-109959958 retained_intron
ENST00000547815 (GIT2-006) 109947322-109996296 protein_coding
ENST00000548000 (GIT2-018) 109933112-109943021 processed_transcript
ENST00000548643 (GIT2-012) 109980952-109996368 retained_intron
ENST00000548655 (GIT2-019) 109934037-109940501 processed_transcript
ENST00000549999 (GIT2-009) 109934040-109954550 retained_intron
ENST00000550186 (GIT2-005) 109933057-109996224 protein_coding
ENST00000550480 (GIT2-020) 109938535-109939685 retained_intron
ENST00000551209 (GIT2-011) 109932978-109996224 protein_coding
ENST00000551455 (GIT2-002) 109950694-109996373 retained_intron
ENST00000551721 (GIT2-015) 109961651-109983180 retained_intron
ENST00000552978 (GIT2-023) 109933038-109938977 retained_intron
ENST00000553118 (GIT2-008) 109932615-109996389 protein_coding
ENSG00000277595 (RP11-946P6.6)
 ENST00000619452 (RP11-946P6.6-001) 110032245-110032803 sense_intronic
ENSG00000280426 (RP11-837J7.3)
 ENST00000624844 (RP11-837J7.3-001) 109997419-109999127 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0001GH_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041890-ENSMUSG00000041870 CGP 10090 5:114727407-114806200
GeneTranscriptPositionBiotype
ENSMUSG00000041870 (Ankrd13a)
ankyrin repeat domain 13a 		ENSMUST00000102578 (Ankrd13a-001) 114774677-114805822 protein_coding
ENSMUST00000129001 (Ankrd13a-003) 114795743-114806200 processed_transcript
ENSMUST00000131803 (Ankrd13a-004) 114799457-114806200 processed_transcript
ENSMUST00000137519 (Ankrd13a-005) 114786045-114803611 protein_coding
ENSMUST00000140604 (Ankrd13a-002) 114774945-114806200 processed_transcript
ENSMUSG00000041890 (Git2)
G protein-coupled receptor kinase-interactor 2 		ENSMUST00000043283 (Git2-002) 114727411-114773492 protein_coding
ENSMUST00000086564 (Git2-005) 114729575-114773462 protein_coding
ENSMUST00000112183 (Git2-004) 114727411-114773434 protein_coding
ENSMUST00000112185 (Git2-001) 114727407-114773495 protein_coding
ENSMUST00000130925 (Git2-012) 114733864-114748269 protein_coding
ENSMUST00000131016 (Git2-009) 114764351-114775517 protein_coding
ENSMUST00000131582 (Git2-008) 114764455-114773495 processed_transcript
ENSMUST00000131993 (Git2-010) 114748207-114766523 protein_coding
ENSMUST00000133096 (Git2-003) 114765675-114773467 retained_intron
ENSMUST00000135793 (Git2-013) 114733216-114734166 processed_transcript
ENSMUST00000144191 (Git2-011) 114764542-114767153 processed_transcript
ENSMUST00000146044 (Git2-007) 114727411-114743868 protein_coding
ENSMUST00000153756 (Git2-014) 114747319-114773495 retained_intron
ENSMUST00000155908 (Git2-006) 114729870-114769718 protein_coding
ENSMUST00000178440 (Git2-201) 114727408-114773492 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GH_0001ENSDARG00000061901ENSDART00000088819ENSDARG00000061915ENSDART00000088881CIL_0001GH_0002ENSG00000076513ENST00000261739ENST00000546476ENST00000547419ENST00000547639ENST00000549826ENST00000550404ENST00000551491ENST00000553025ENST00000553246ENST00000553251ENSG00000139436ENST00000320063ENST00000354574ENST00000355312ENST00000361006ENST00000457474ENST00000546613ENST00000547267ENST00000547694ENST00000547815ENST00000548000ENST00000548643ENST00000548655ENST00000549999ENST00000550186ENST00000550480ENST00000551209ENST00000551455ENST00000551721ENST00000552978ENST00000553118ENSG00000277595ENST00000619452ENSG00000280426ENST00000624844CIL_0001GH_0003ENSMUSG00000041870ENSMUST00000102578ENSMUST00000129001ENSMUST00000131803ENSMUST00000137519ENSMUST00000140604ENSMUSG00000041890ENSMUST00000043283ENSMUST00000086564ENSMUST00000112183ENSMUST00000112185ENSMUST00000130925ENSMUST00000131016ENSMUST00000131582ENSMUST00000131993ENSMUST00000133096ENSMUST00000135793ENSMUST00000144191ENSMUST00000146044ENSMUST00000153756ENSMUST00000155908ENSMUST00000178440
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GH_0001ENSDARG00000061901ENSDART00000088819ENSDARG00000061915ENSDART00000088881CIL_0001GH_0002ENSG00000076513ENST00000261739ENST00000546476ENST00000547639ENSG00000139436ENST00000320063ENST00000354574ENST00000355312ENST00000361006ENST00000457474ENST00000547815ENST00000550186ENST00000551209ENST00000551455ENST00000553118ENSG00000277595ENST00000619452ENSG00000280426ENST00000624844CIL_0001GH_0003ENSMUSG00000041870ENSMUST00000102578ENSMUST00000129001ENSMUST00000131803ENSMUST00000137519ENSMUST00000140604ENSMUSG00000041890ENSMUST00000043283ENSMUST00000086564ENSMUST00000112183ENSMUST00000112185ENSMUST00000130925ENSMUST00000146044ENSMUST00000155908ENSMUST00000178440
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061901 ENSDART00000088819 N/A N/A N/A 0.400±0.00 N/A N/A 2.233±0.00 N/A 0.221±0.00 N/A 0.917±0.00 N/A N/A N/A
ENSDARG00000061915 ENSDART00000088881 N/A N/A N/A 1.604±0.00 N/A N/A 5.438±0.00 0.409±0.00 0.121±0.00 N/A 0.841±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000076513 ENST00000261739 2.612±0.00 10.671±0.00 N/A 7.791±0.00 3.620±1.80 5.398±0.00 3.217±2.28 3.119±0.00 7.041±0.00 6.482±2.85 2.332±0.00 6.262±1.25 4.488±1.55 17.385±4.60
ENST00000546476 N/A N/A 6.332±0.00 N/A 7.503±0.00 6.298±0.00 2.436±0.00 N/A 11.888±0.00 8.737±0.00 N/A 9.723±2.72 12.751±0.00 27.008±0.00
ENST00000547419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547639 N/A N/A 3.618±0.00 N/A N/A 5.254±0.00 N/A N/A 7.363±0.00 7.445±0.00 N/A 8.273±0.00 19.770±0.00 38.585±16.30
ENST00000549826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139436 ENST00000320063 N/A N/A N/A N/A N/A 1.903±0.00 N/A N/A N/A 2.858±0.00 N/A 2.551±0.00 N/A N/A
ENST00000354574 N/A N/A N/A N/A 3.097±0.00 1.176±0.00 2.501±0.00 2.105±0.00 1.105±0.00 N/A N/A 2.843±0.00 1.608±0.00 N/A
ENST00000355312 5.669±0.00 8.025±0.00 2.016±0.00 1.812±0.00 2.493±1.26 2.260±0.00 2.963±1.97 4.211±0.00 1.414±0.10 3.101±1.17 7.318±0.00 5.315±2.16 8.059±0.59 2.290±0.00
ENST00000361006 N/A N/A N/A 0.704±0.00 1.080±0.00 2.041±0.36 N/A N/A N/A N/A N/A N/A N/A 6.191±0.50
ENST00000457474 N/A N/A N/A 1.813±0.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547815 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.029±0.00 N/A N/A N/A N/A
ENST00000548000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550186 N/A N/A N/A N/A N/A N/A N/A 2.020±0.00 N/A N/A N/A N/A N/A N/A
ENST00000550480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551209 N/A N/A N/A N/A N/A N/A N/A N/A 3.607±0.00 N/A 2.969±0.00 N/A N/A N/A
ENST00000551455 N/A N/A 3.983±0.00 N/A 4.516±0.00 3.342±0.00 2.104±0.00 1.723±0.00 N/A N/A N/A 3.400±0.00 N/A N/A
ENST00000551721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.923±0.00
ENSG00000277595 ENST00000619452 0.113±0.00 2.204±0.00 0.387±0.00 0.358±0.02 1.393±0.95 2.790±0.00 0.107±0.07 0.268±0.00 0.473±0.44 0.242±0.12 N/A 0.341±0.03 0.226±0.00 0.823±0.32
ENSG00000280426 ENST00000624844 N/A 0.052±0.00 N/A 0.056±0.03 0.012±0.00 N/A 0.012±0.00 0.013±0.00 0.022±0.00 0.052±0.00 N/A 0.048±0.02 0.055±0.00 2.549±1.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041870 ENSMUST00000102578 26.569±0.95 6.022±1.05 23.712±0.17 15.181±7.25 19.903±4.00 33.861±4.67 8.977±0.43 16.732±3.46 15.615±11.75 37.481±3.38 5.519±0.51 22.534±8.17 58.257±21.20 65.777±21.13
ENSMUST00000129001 N/A 9.979±0.00 N/A 1.623±0.00 N/A N/A N/A 6.317±0.82 3.373±0.58 N/A N/A 14.421±0.00 13.863±2.96 N/A
ENSMUST00000131803 N/A N/A N/A N/A N/A N/A N/A 5.543±0.07 2.674±0.00 N/A N/A N/A N/A N/A
ENSMUST00000137519 N/A N/A N/A 22.459±0.00 N/A N/A N/A N/A N/A N/A N/A 38.087±23.16 141.518±102.74 156.700±0.00
ENSMUST00000140604 N/A 20.485±1.86 N/A N/A 19.062±2.67 35.111±10.13 N/A 4.345±0.00 3.074±0.90 17.132±3.98 N/A 12.860±5.58 N/A N/A
ENSMUSG00000041890 ENSMUST00000043283 2.774±0.00 N/A 1.542±0.14 3.082±0.30 7.553±1.67 7.071±1.62 0.965±0.00 3.780±1.36 1.895±0.99 N/A 0.619±0.00 4.732±1.43 3.074±0.05 1.239±0.39
ENSMUST00000086564 9.099±1.37 3.826±0.00 5.852±0.08 6.436±3.04 9.537±2.15 4.355±0.85 4.961±0.62 5.717±0.66 4.275±3.39 13.057±3.52 1.520±0.25 8.992±2.99 27.098±7.31 2.279±0.70
ENSMUST00000112183 N/A N/A N/A 4.047±2.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112185 8.864±3.32 9.080±1.06 5.444±0.09 N/A 4.520±1.20 2.875±0.00 3.216±1.70 1.989±0.44 1.809±0.29 15.335±4.15 2.499±0.27 5.921±2.50 7.359±3.08 0.135±0.00
ENSMUST00000130925 N/A N/A N/A 22.575±0.00 N/A N/A N/A N/A N/A N/A N/A 45.649±0.00 111.855±35.64 10.149±0.00
ENSMUST00000131016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146044 N/A 4.250±1.02 N/A N/A 7.577±2.95 3.136±1.00 1.464±0.00 N/A 1.156±0.08 7.577±0.00 N/A 5.974±1.70 N/A N/A
ENSMUST00000153756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155908 N/A N/A N/A N/A 8.866±0.00 N/A N/A N/A N/A N/A 1.336±0.20 9.494±1.11 24.035±8.48 1.699±0.58
ENSMUST00000178440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.156±0.00 N/A N/A

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