C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoic acid receptor, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000077092 RARB 9606 + 3:25174332-25597932 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330688 RARB-001 25428311-25597932 protein_coding
  ENST00000383772 RARB-005 25174332-25596455 protein_coding
  ENST00000437042 RARB-002 25428263-25597932 protein_coding
  ENST00000458646 RARB-004 25458310-25597932 protein_coding
  ENST00000462272 RARB-008 25428716-25596649 processed_transcript
  ENST00000479097 RARB-009 25428716-25596649 processed_transcript
  ENST00000480001 RARB-007 25428716-25596649 processed_transcript
  ENST00000489694 RARB-006 25428701-25462545 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyENST00000330688
Transcript ID Bladder Heart Kidney
ENST00000330688 3.095±0.00 5.735±0.00 5.733±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001657 IEA ureteric bud development
GO:0002068 IEA glandular epithelial cell development
GO:0003148 IEA outflow tract septum morphogenesis
GO:0003406 IEA retinal pigment epithelium development
GO:0003417 IEA growth plate cartilage development
GO:0003677 TAS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0003708 IEA retinoic acid receptor activity
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007165 TAS signal transduction
GO:0008144 IEA drug binding
GO:0008270 IEA zinc ion binding
GO:0008284 IEA positive regulation of cell proliferation
GO:0008285 IEA negative regulation of cell proliferation
GO:0010467 TAS gene expression
GO:0021756 IEA striatum development
GO:0022008 IEA neurogenesis
GO:0031641 IEA regulation of myelination
GO:0032331 IEA negative regulation of chondrocyte differentiation
GO:0032403 IEA protein complex binding
GO:0035116 IEA embryonic hindlimb morphogenesis
GO:0035264 IEA multicellular organism growth
GO:0043065 IEA positive regulation of apoptotic process
GO:0043066 IEA negative regulation of apoptotic process
GO:0043068 IEA positive regulation of programmed cell death
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046965 IEA retinoid X receptor binding
GO:0048048 IEA embryonic eye morphogenesis
GO:0048384 IEA retinoic acid receptor signaling pathway
GO:0048566 IMP embryonic digestive tract development
GO:0055012 IEA ventricular cardiac muscle cell differentiation
GO:0060041 IEA retina development in camera-type eye
GO:0060348 IEA bone development
GO:0061037 IEA negative regulation of cartilage development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000017491 Rarb retinoic acid receptor, beta protein_coding Mus_musculus

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