C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: amphiphysin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000078053 AMPH 9606 - 7:38383704-38631567 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325590 AMPH-002 38383704-38631420 protein_coding
  ENST00000356264 AMPH-001 38383704-38631567 protein_coding
  ENST00000441628 AMPH-003 38384818-38463113 protein_coding
  ENST00000450124 AMPH-006 38391988-38429285 nonsense_mediated_decay
  ENST00000460887 AMPH-009 38389848-38392719 processed_transcript
  ENST00000462072 AMPH-007 38394070-38430055 retained_intron
  ENST00000467580 AMPH-005 38391988-38429285 processed_transcript
  ENST00000471913 AMPH-004 38391988-38429285 processed_transcript
  ENST00000475581 AMPH-008 38391891-38418031 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325590ENST00000356264ENST00000441628ENST00000462072ENST00000467580ENST00000471913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325590 1.191±0.00 0.197±0.00 N/A N/A 0.636±0.07 2.076±1.96 0.373±0.21 0.652±0.00 0.213±0.09 N/A N/A 0.507±0.27 0.118±0.06 1.522±0.29
ENST00000356264 4.210±0.00 N/A 0.344±0.00 23.438±8.83 N/A N/A N/A N/A N/A 0.181±0.00 1.696±0.00 N/A N/A N/A
ENST00000441628 N/A N/A N/A N/A N/A N/A N/A 0.553±0.00 N/A N/A N/A N/A 0.022±0.00 N/A
ENST00000462072 N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467580 N/A N/A N/A N/A 0.170±0.00 N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A
ENST00000471913 N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A 0.148±0.05 0.024±0.00 0.759±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IE CIL_0006IE_0002 CGP 7:38178222-38631567

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005543 IDA phospholipid binding
GO:0005737 IEA cytoplasm
GO:0006897 TAS endocytosis
GO:0007268 TAS synaptic transmission
GO:0007612 IEA learning
GO:0008021 IEA synaptic vesicle
GO:0015629 TAS actin cytoskeleton
GO:0030054 IEA cell junction
GO:0031256 IDA leading edge membrane
GO:0048488 IEA synaptic vesicle endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007663 amph amphiphysin protein_coding Danio_rerio
ENSMUSG00000021314 Amph amphiphysin protein_coding Mus_musculus

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