C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integral membrane protein 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000078596 ITM2A 9606 - X:79360384-79367667 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373298 ITM2A-001 79360384-79367359 protein_coding
  ENST00000434584 ITM2A-201 79360388-79367552 protein_coding
  ENST00000461357 ITM2A-005 79367104-79367667 processed_transcript
  ENST00000462038 ITM2A-003 79363112-79363556 processed_transcript
  ENST00000469541 ITM2A-002 79360962-79366927 processed_transcript
  ENST00000482194 ITM2A-004 79362581-79367318 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373298ENST00000434584ENST00000462038ENST00000469541ENST00000482194
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373298 12.709±0.00 13.169±0.00 N/A 13.244±4.30 11.829±10.27 10.197±8.33 10.881±9.61 2.117±1.91 3.523±2.89 14.946±12.00 3.694±0.00 18.960±13.74 3.817±0.98 27.930±0.00
ENST00000434584 N/A N/A 0.588±0.00 1.134±0.00 N/A N/A 2.507±1.83 N/A N/A 3.905±2.72 1.419±0.08 0.938±0.41 2.742±0.85 4.828±0.00
ENST00000462038 N/A N/A 5.909±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469541 10.931±0.00 5.859±0.00 1.301±0.00 14.991±0.00 2.104±0.00 8.807±6.70 17.591±0.00 1.953±1.35 4.544±3.53 19.450±0.00 6.832±2.25 11.423±9.27 8.961±3.27 6.946±0.00
ENST00000482194 N/A N/A N/A 22.311±0.00 N/A N/A N/A 6.816±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000C2 CIL_0000C2_0001 CGP X:79170972-79367667
CIL_0003KD CIL_0003KD_0001 CGP X:79360384-80031769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031239 Itm2a integral membrane protein 2A protein_coding Mus_musculus

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