C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000078596-ENSG00000122145 CGP 9606 X:79360384-80031769
GeneTranscriptPositionBiotype
ENSG00000078596 (ITM2A)
integral membrane protein 2A 		ENST00000373298 (ITM2A-001) 79360384-79367359 protein_coding
ENST00000434584 (ITM2A-201) 79360388-79367552 protein_coding
ENST00000461357 (ITM2A-005) 79367104-79367667 processed_transcript
ENST00000462038 (ITM2A-003) 79363112-79363556 processed_transcript
ENST00000469541 (ITM2A-002) 79360962-79366927 processed_transcript
ENST00000482194 (ITM2A-004) 79362581-79367318 processed_transcript
ENSG00000122145 (TBX22)
T-box 22 		ENST00000373291 (TBX22-002) 80023069-80031769 protein_coding
ENST00000373294 (TBX22-001) 80022242-80031769 protein_coding
ENST00000373296 (TBX22-003) 80014756-80031373 protein_coding
ENST00000476373 (TBX22-004) 80014769-80022654 processed_transcript
ENSG00000270268 (RP1-164L12.1)
 ENST00000604895 (RP1-164L12.1-001) 79369364-79370165 processed_pseudogene
CIL_0003KD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031239-ENSMUSG00000031241 CGP 10090 X:107397099-107688978
GeneTranscriptPositionBiotype
ENSMUSG00000031239 (Itm2a)
integral membrane protein 2A 		ENSMUST00000033591 (Itm2a-001) 107397099-107403376 protein_coding
ENSMUSG00000031241 (Tbx22)
T-box 22 		ENSMUST00000068451 (Tbx22-003) 107678963-107688978 protein_coding
ENSMUST00000118986 (Tbx22-002) 107676512-107686897 protein_coding
ENSMUST00000168174 (Tbx22-001) 107667964-107688975 protein_coding
ENSMUST00000168403 (Tbx22-004) 107679015-107687622 protein_coding
ENSMUST00000172682 (Tbx22-005) 107667964-107681173 nonsense_mediated_decay
ENSMUSG00000055700 (4933401B06Rik)
RIKEN cDNA 4933401B06 gene 		ENSMUST00000139758 (4933401B06Rik-001) 107542591-107543745 transcribed_processed_pseudogene
ENSMUST00000142024 (4933401B06Rik-002) 107542582-107543800 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KD_0001ENSG00000078596ENST00000373298ENST00000434584ENST00000461357ENST00000462038ENST00000469541ENST00000482194ENSG00000122145ENST00000373291ENST00000373294ENST00000373296ENST00000476373ENSG00000270268ENST00000604895CIL_0003KD_0002ENSMUSG00000031239ENSMUST00000033591ENSMUSG00000031241ENSMUST00000068451ENSMUST00000118986ENSMUST00000168174ENSMUST00000168403ENSMUST00000172682ENSMUSG00000055700ENSMUST00000139758ENSMUST00000142024
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KD_0001ENSG00000078596ENST00000373298ENST00000434584ENST00000462038ENST00000469541ENST00000482194ENSG00000122145ENST00000373291ENST00000373294ENST00000373296ENSG00000270268ENST00000604895CIL_0003KD_0002ENSMUSG00000031239ENSMUST00000033591ENSMUSG00000031241ENSMUST00000068451ENSMUST00000118986ENSMUST00000168403ENSMUST00000172682ENSMUSG00000055700ENSMUST00000139758ENSMUST00000142024
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000078596 ENST00000373298 12.709±0.00 13.169±0.00 N/A 13.244±4.30 11.829±10.27 10.197±8.33 10.881±9.61 2.117±1.91 3.523±2.89 14.946±12.00 3.694±0.00 18.960±13.74 3.817±0.98 27.930±0.00
ENST00000434584 N/A N/A 0.588±0.00 1.134±0.00 N/A N/A 2.507±1.83 N/A N/A 3.905±2.72 1.419±0.08 0.938±0.41 2.742±0.85 4.828±0.00
ENST00000461357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462038 N/A N/A 5.909±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469541 10.931±0.00 5.859±0.00 1.301±0.00 14.991±0.00 2.104±0.00 8.807±6.70 17.591±0.00 1.953±1.35 4.544±3.53 19.450±0.00 6.832±2.25 11.423±9.27 8.961±3.27 6.946±0.00
ENST00000482194 N/A N/A N/A 22.311±0.00 N/A N/A N/A 6.816±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000122145 ENST00000373291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 0.758±0.00
ENST00000373294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.598±0.00
ENST00000373296 N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A 1.521±0.94
ENST00000476373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270268 ENST00000604895 N/A 0.036±0.00 N/A N/A 0.147±0.00 N/A 0.074±0.06 N/A N/A 0.538±0.00 N/A 0.137±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031239 ENSMUST00000033591 19.244±9.40 4.518±1.40 46.565±4.15 23.143±12.32 59.991±2.36 3.525±0.37 6.712±0.39 3.217±0.78 24.295±26.43 12.934±0.65 42.074±2.79 34.483±9.04 67.590±31.06 1.204±0.61
ENSMUSG00000031241 ENSMUST00000068451 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 0.004±0.00 N/A
ENSMUST00000118986 0.017±0.00 N/A 0.002±0.00 N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A 0.010±0.00 0.002±0.00 0.598±0.34
ENSMUST00000168174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168403 0.028±0.00 N/A N/A 0.033±0.00 N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A 0.019±0.02 0.583±0.36
ENSMUST00000172682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.204±0.00
ENSMUSG00000055700 ENSMUST00000139758 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A 0.029±0.00 1.304±0.33
ENSMUST00000142024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.304±2.73

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