C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: secretin receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000080293 SCTR 9606 - 2:119439843-119524494 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000019103 SCTR-001 119439843-119524494 protein_coding
  ENST00000485440 SCTR-002 119439845-119479889 retained_intron
  ENST00000494326 SCTR-003 119439845-119441663 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000019103ENST00000485440ENST00000494326
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000019103 0.033±0.00 N/A 0.059±0.00 N/A 0.063±0.00 5.684±0.00 0.063±0.00 1.035±0.00 0.077±0.00 0.019±0.00 0.078±0.04 0.330±0.05
ENST00000485440 N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A 0.056±0.00 N/A N/A
ENST00000494326 0.056±0.00 0.145±0.00 N/A 0.142±0.00 N/A N/A 0.256±0.00 1.546±0.00 0.341±0.00 0.705±0.00 N/A 0.403±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093M CIL_00093M_0001 VISTA 2:119187057-119791464

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005881 IDA cytoplasmic microtubule
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007586 TAS digestion
GO:0007588 TAS excretion
GO:0015055 TAS secretin receptor activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000026387 Sctr secretin receptor protein_coding Mus_musculus

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