C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000019103 SCTR-001 ENSG00000080293 9606 - 2:119439843-119524494 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000019103
Transcript ID Adipose Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000019103 0.033±0.00 0.059±0.00 0.063±0.00 5.684±0.00 0.063±0.00 1.035±0.00 0.077±0.00 0.019±0.00 0.078±0.04 0.330±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093M CIL_00093M_0001 VISTA 2:119187057-119791464

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005881 IDA cytoplasmic microtubule
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007586 TAS digestion
GO:0007588 TAS excretion
GO:0015055 TAS secretin receptor activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072886 Sctr-001 protein_coding Mus_musculus 0 1190
ENSMUST00000189037 Sctr-002 protein_coding Mus_musculus 0 1181
ENSDART00000143759 vipr1b-001 protein_coding Danio_rerio 3e-26 124

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