C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000083457 ITGAE 9606 - 17:3714628-3801243 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263087 ITGAE-001 3714628-3801243 protein_coding
  ENST00000570360 ITGAE-004 3714692-3723854 processed_transcript
  ENST00000570415 ITGAE-009 3714666-3728474 retained_intron
  ENST00000571185 ITGAE-005 3724318-3738953 processed_transcript
  ENST00000571937 ITGAE-003 3714653-3718379 retained_intron
  ENST00000572121 ITGAE-008 3751870-3754696 processed_transcript
  ENST00000572179 ITGAE-002 3714628-3723837 processed_transcript
  ENST00000572433 ITGAE-007 3714636-3720619 retained_intron
  ENST00000574026 ITGAE-006 3728014-3743540 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263087ENST00000570360ENST00000570415ENST00000571937ENST00000572179ENST00000572433
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263087 N/A N/A N/A N/A 1.084±0.00 0.149±0.00 N/A N/A N/A 0.946±0.31 N/A 0.584±0.00 0.133±0.00 N/A
ENST00000570360 N/A 12.778±0.00 N/A N/A N/A 1.647±0.00 2.138±0.00 N/A 0.458±0.00 5.652±0.00 N/A 3.794±0.00 1.718±0.73 8.441±0.00
ENST00000570415 N/A N/A N/A 1.380±0.00 N/A 1.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571937 N/A N/A N/A N/A N/A 0.307±0.00 0.034±0.00 0.190±0.00 0.228±0.00 N/A N/A N/A N/A N/A
ENST00000572179 9.045±0.00 8.633±0.00 0.550±0.00 6.082±2.75 20.591±0.00 5.380±4.21 3.358±3.25 6.106±4.89 2.390±1.85 4.761±0.00 6.636±3.60 14.240±7.06 2.901±1.07 16.654±1.03
ENST00000572433 N/A 5.274±0.00 N/A N/A N/A N/A N/A 1.800±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Q0 CIL_0001Q0_0001 CGP 17:3714628-3801243

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex
GO:0009897 IEA external side of plasma membrane
GO:0030198 TAS extracellular matrix organization
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057787 ITGAE (1 of 2) integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide) protein_coding Danio_rerio
ENSMUSG00000005947 Itgae integrin alpha E, epithelial-associated protein_coding Mus_musculus

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