C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001Q0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000083457-ENSG00000083457 CGP 9606 17:3714628-3801243
GeneTranscriptPositionBiotype
ENSG00000083457 (ITGAE)
integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)
ENST00000263087 (ITGAE-001) 3714628-3801243 protein_coding
ENST00000570360 (ITGAE-004) 3714692-3723854 processed_transcript
ENST00000570415 (ITGAE-009) 3714666-3728474 retained_intron
ENST00000571185 (ITGAE-005) 3724318-3738953 processed_transcript
ENST00000571937 (ITGAE-003) 3714653-3718379 retained_intron
ENST00000572121 (ITGAE-008) 3751870-3754696 processed_transcript
ENST00000572179 (ITGAE-002) 3714628-3723837 processed_transcript
ENST00000572433 (ITGAE-007) 3714636-3720619 retained_intron
ENST00000574026 (ITGAE-006) 3728014-3743540 protein_coding
ENSG00000177602 (GSG2)
germ cell associated 2 (haspin)
ENST00000325418 (GSG2-001) 3723903-3726699 protein_coding
ENSG00000262692 (CTD-3195I5.3)
ENST00000571741 (CTD-3195I5.3-001) 3721628-3722488 antisense
CIL_0001Q0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005947-ENSMUSG00000005947 CGP 10090 11:73090583-73147446
GeneTranscriptPositionBiotype
ENSMUSG00000005947 (Itgae)
integrin alpha E, epithelial-associated
ENSMUST00000006101 (Itgae-001) 73090583-73147446 protein_coding
ENSMUST00000102537 (Itgae-002) 73090583-73134834 protein_coding
ENSMUSG00000050107 (Gsg2)
germ cell-specific gene 2
ENSMUST00000052140 (Gsg2-001) 73135485-73138294 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Q0_0001ENSG00000083457ENST00000263087ENST00000570360ENST00000570415ENST00000571185ENST00000571937ENST00000572121ENST00000572179ENST00000572433ENST00000574026ENSG00000177602ENST00000325418ENSG00000262692ENST00000571741CIL_0001Q0_0002ENSMUSG00000005947ENSMUST00000006101ENSMUST00000102537ENSMUSG00000050107ENSMUST00000052140
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Q0_0001ENSG00000083457ENST00000263087ENST00000570360ENST00000570415ENST00000571937ENST00000572179ENST00000572433ENSG00000177602ENST00000325418ENSG00000262692ENST00000571741CIL_0001Q0_0002ENSMUSG00000005947ENSMUST00000006101ENSMUST00000102537ENSMUSG00000050107ENSMUST00000052140
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083457 ENST00000263087 N/A N/A N/A N/A 1.084±0.00 0.149±0.00 N/A N/A N/A 0.946±0.31 N/A 0.584±0.00 0.133±0.00 N/A
ENST00000570360 N/A 12.778±0.00 N/A N/A N/A 1.647±0.00 2.138±0.00 N/A 0.458±0.00 5.652±0.00 N/A 3.794±0.00 1.718±0.73 8.441±0.00
ENST00000570415 N/A N/A N/A 1.380±0.00 N/A 1.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571937 N/A N/A N/A N/A N/A 0.307±0.00 0.034±0.00 0.190±0.00 0.228±0.00 N/A N/A N/A N/A N/A
ENST00000572121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572179 9.045±0.00 8.633±0.00 0.550±0.00 6.082±2.75 20.591±0.00 5.380±4.21 3.358±3.25 6.106±4.89 2.390±1.85 4.761±0.00 6.636±3.60 14.240±7.06 2.901±1.07 16.654±1.03
ENST00000572433 N/A 5.274±0.00 N/A N/A N/A N/A N/A 1.800±0.00 N/A N/A N/A N/A N/A N/A
ENST00000574026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177602 ENST00000325418 N/A N/A N/A N/A N/A N/A 0.009±0.00 0.055±0.00 N/A N/A 0.510±0.00 3.200±0.00 1.094±0.00 3.104±0.00
ENSG00000262692 ENST00000571741 2.402±0.00 N/A N/A 2.823±0.00 2.041±0.00 1.253±0.15 0.542±0.00 1.801±0.00 0.807±0.00 0.937±0.00 0.361±0.00 1.493±0.00 0.273±0.00 2.437±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005947 ENSMUST00000006101 0.652±0.08 0.235±0.10 0.164±0.03 0.049±0.00 3.122±1.96 0.878±0.25 0.106±0.04 0.308±0.13 0.081±0.05 1.549±0.52 0.082±0.07 0.398±0.21 0.025±0.02 5.987±2.30
ENSMUST00000102537 0.368±0.04 0.252±0.17 0.065±0.00 0.032±0.00 2.484±1.87 0.796±0.45 0.057±0.01 0.084±0.00 0.069±0.05 0.958±0.28 0.032±0.01 0.408±0.32 0.029±0.03 N/A
ENSMUSG00000050107 ENSMUST00000052140 0.943±0.43 0.466±0.16 0.242±0.07 0.924±0.84 0.690±0.00 1.568±0.38 0.093±0.06 0.647±0.12 2.820±2.34 0.502±0.00 0.044±0.02 1.503±0.47 1.539±1.01 144.422±38.79

Loading