C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: charged multivesicular body protein 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000083937 CHMP2B 9606 + 3:87227271-87255548 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263780 CHMP2B-001 87227285-87255499 protein_coding
  ENST00000466696 CHMP2B-005 87253049-87253913 retained_intron
  ENST00000471660 CHMP2B-002 87227271-87255548 protein_coding
  ENST00000472024 CHMP2B-003 87227309-87253470 protein_coding
  ENST00000494980 CHMP2B-004 87227302-87254224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263780ENST00000471660ENST00000472024ENST00000494980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263780 7.741±0.00 8.373±0.00 1.987±0.00 9.571±2.08 6.502±1.15 4.983±1.05 4.920±2.32 7.184±2.94 5.672±0.57 7.473±1.44 1.980±0.57 11.871±3.06 8.620±1.18 8.465±2.56
ENST00000471660 N/A N/A N/A N/A N/A 2.556±0.00 N/A N/A N/A N/A N/A 3.072±0.00 2.991±0.00 N/A
ENST00000472024 N/A N/A N/A N/A 3.836±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494980 3.847±0.00 4.739±0.00 N/A 7.712±0.00 3.605±0.00 3.805±0.00 3.682±0.00 8.438±0.00 N/A 5.413±0.00 N/A N/A 4.124±0.00 6.148±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A0 CIL_0005A0_0002 CGP 3:86937969-87255548

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005768 IEA endosome
GO:0005829 TAS cytosol
GO:0007034 IEA vacuolar transport
GO:0008219 IEA cell death
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016032 TAS viral process
GO:0016197 TAS endosomal transport
GO:0019058 TAS viral life cycle
GO:0019904 IPI protein domain specific binding
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002190 chmp2bb chromatin modifying protein 2Bb protein_coding Danio_rerio
ENSDARG00000068683 chmp2ba chromatin modifying protein 2Ba protein_coding Danio_rerio
ENSMUSG00000004843 Chmp2b charged multivesicular body protein 2B protein_coding Mus_musculus

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