C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 47
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000085433 WDR47 9606 - 1:108970214-109042113 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357672 WDR47-201 108970218-109042102 protein_coding
  ENST00000361054 WDR47-003 108970214-109042075 protein_coding
  ENST00000369962 WDR47-002 108970214-109042075 protein_coding
  ENST00000369965 WDR47-001 108970214-109042113 protein_coding
  ENST00000400794 WDR47-004 108970214-109041986 protein_coding
  ENST00000528747 WDR47-008 109013850-109041986 protein_coding
  ENST00000529074 WDR47-006 109011546-109042105 protein_coding
  ENST00000530772 WDR47-005 109011527-109041547 protein_coding
  ENST00000531337 WDR47-007 109011576-109042102 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357672ENST00000361054ENST00000369962ENST00000369965ENST00000400794
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357672 N/A N/A N/A N/A 0.667±0.05 N/A 0.286±0.08 0.525±0.00 0.169±0.00 N/A N/A 0.600±0.00 0.151±0.00 1.495±0.00
ENST00000361054 1.047±0.00 0.424±0.00 N/A N/A N/A 1.928±0.00 0.478±0.00 N/A N/A 2.548±0.00 N/A N/A 0.275±0.00 4.329±0.07
ENST00000369962 1.620±0.00 N/A N/A 12.172±0.00 1.278±0.07 0.544±0.08 0.958±0.40 N/A N/A 0.985±0.00 2.221±0.00 0.361±0.00 0.851±0.29 N/A
ENST00000369965 N/A N/A 0.441±0.00 12.994±6.28 0.784±0.03 1.099±0.00 1.038±0.09 N/A 1.840±0.00 N/A 3.396±0.00 1.134±0.00 0.286±0.00 1.646±0.00
ENST00000400794 N/A N/A N/A N/A N/A N/A N/A N/A 0.226±0.00 N/A N/A N/A N/A 7.667±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098X CIL_00098X_0001 VISTA 1:108953074-109556228

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0007275 IEA multicellular organismal development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059685 wdr47b WD repeat domain 47b protein_coding Danio_rerio
ENSDARG00000078136 wdr47a WD repeat domain 47a protein_coding Danio_rerio
ENSMUSG00000040389 Wdr47 WD repeat domain 47 protein_coding Mus_musculus

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