C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: copine III
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000085719 CPNE3 9606 + 8:86484830-86561498 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000198765 CPNE3-201 86484830-86561498 protein_coding
  ENST00000517354 CPNE3-012 86546628-86554979 retained_intron
  ENST00000517391 CPNE3-010 86529063-86551233 protein_coding
  ENST00000517490 CPNE3-001 86514427-86561498 protein_coding
  ENST00000517862 CPNE3-011 86540275-86545333 retained_intron
  ENST00000522240 CPNE3-009 86514562-86529049 protein_coding
  ENST00000523469 CPNE3-008 86514504-86532580 protein_coding
  ENST00000523588 CPNE3-013 86551005-86551512 retained_intron
  ENST00000614678 CPNE3-002 86547306-86561411 retained_intron
  ENST00000620393 CPNE3-004 86514438-86532528 protein_coding
  ENST00000621245 CPNE3-007 86514459-86532539 protein_coding
  ENST00000621526 CPNE3-005 86514443-86528571 protein_coding
  ENST00000621783 CPNE3-003 86514437-86544808 protein_coding
  ENST00000622183 CPNE3-006 86514446-86515201 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000198765ENST00000517490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000198765 5.080±0.00 N/A 6.140±0.00 N/A 9.332±1.23 7.572±1.83 N/A 14.199±0.00 6.963±0.00 4.846±0.00 N/A 7.257±1.08 5.130±1.73 5.182±0.00
ENST00000517490 10.640±0.00 7.630±0.00 N/A 5.830±1.62 7.846±0.00 5.714±0.04 11.045±5.28 8.325±2.18 9.207±0.00 10.306±1.87 5.937±0.00 9.718±3.94 7.008±1.25 5.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052S CIL_00052S_0002 CGP 8:86342738-86514357

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005215 TAS transporter activity
GO:0005515 IEA protein binding
GO:0005544 TAS calcium-dependent phospholipid binding
GO:0005737 NAS cytoplasm
GO:0005829 IDA cytosol
GO:0006468 IDA protein phosphorylation
GO:0006629 TAS lipid metabolic process
GO:0016192 TAS vesicle-mediated transport
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013175 cpne3 copine III protein_coding Danio_rerio
ENSMUSG00000028228 Cpne3 copine III protein_coding Mus_musculus

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