C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517490 CPNE3-001 ENSG00000085719 9606 + 8:86514427-86561498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000517490
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000517490 10.640±0.00 7.630±0.00 5.830±1.62 7.846±0.00 5.714±0.04 11.045±5.28 8.325±2.18 9.207±0.00 10.306±1.87 5.937±0.00 9.718±3.94 7.008±1.25 5.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052S CIL_00052S_0002 CGP 8:86342738-86514357

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005215 TAS transporter activity
GO:0005515 IEA protein binding
GO:0005544 TAS calcium-dependent phospholipid binding
GO:0005737 NAS cytoplasm
GO:0005829 IDA cytosol
GO:0006468 IDA protein phosphorylation
GO:0006629 TAS lipid metabolic process
GO:0016192 TAS vesicle-mediated transport
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029885 Cpne3-001 protein_coding Mus_musculus 0 2185
ENSMUST00000108254 Cpne3-002 retained_intron Mus_musculus 0 610

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