C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NOP14 nucleolar protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000087269 NOP14 9606 - 4:2937933-2963385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314262 NOP14-002 2937942-2963368 protein_coding
  ENST00000398071 NOP14-003 2938113-2963333 protein_coding
  ENST00000416614 NOP14-004 2937933-2963385 protein_coding
  ENST00000502735 NOP14-005 2937952-2963356 protein_coding
  ENST00000507120 NOP14-006 2937933-2941716 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000314262ENST00000398071ENST00000416614ENST00000502735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000314262 7.732±0.00 N/A 0.448±0.00 1.721±0.90 3.064±0.00 2.870±1.04 N/A 1.723±0.00 0.849±0.00 N/A 6.629±0.00 5.902±2.30 6.694±0.00 5.998±0.00
ENST00000398071 N/A N/A 2.609±0.00 0.840±0.00 1.250±0.00 1.311±0.00 0.694±0.00 N/A 1.461±0.00 N/A 0.949±0.00 7.998±0.00 3.895±0.00 N/A
ENST00000416614 10.666±0.00 14.847±0.00 N/A 4.630±0.00 5.040±4.21 9.437±0.00 4.365±3.56 13.252±0.00 12.576±0.00 8.431±0.00 35.896±0.00 7.477±3.92 7.214±0.65 11.902±0.00
ENST00000502735 N/A N/A N/A N/A N/A N/A N/A 1.022±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056S CIL_00056S_0001 CGP 4:2930561-2963385
CIL_00056M CIL_00056M_0001 CGP 4:2937933-3040747

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000447 ISS endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 ISS maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 ISS endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 ISS endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 IDA nucleus
GO:0005730 ISS nucleolus
GO:0005739 ISS mitochondrion
GO:0006364 ISS rRNA processing
GO:0016020 IDA membrane
GO:0019899 IPI enzyme binding
GO:0030515 ISS snoRNA binding
GO:0030686 ISS 90S preribosome
GO:0030692 ISS Noc4p-Nop14p complex
GO:0032040 ISS:IEA small-subunit processome
GO:0042274 ISS ribosomal small subunit biogenesis
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033945 NOP14 NOP14 nucleolar protein protein_coding Danio_rerio
ENSMUSG00000036693 Nop14 NOP14 nucleolar protein protein_coding Mus_musculus

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