C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 14 open reading frame 166
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000087302 C14orf166 9606 + 14:51989475-52010691 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261700 C14orf166-001 51989475-52010691 protein_coding
  ENST00000553362 C14orf166-007 51993726-52004702 protein_coding
  ENST00000553479 C14orf166-005 52004012-52004692 retained_intron
  ENST00000553707 C14orf166-003 51997925-51999873 retained_intron
  ENST00000555319 C14orf166-004 51999338-52001916 retained_intron
  ENST00000556760 C14orf166-006 51989615-52004653 protein_coding
  ENST00000557553 C14orf166-002 51989514-52001866 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261700ENST00000553362ENST00000553479ENST00000556760
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261700 N/A 2.112±0.00 0.348±0.00 1.741±0.33 1.033±0.00 1.604±0.00 0.785±0.00 0.662±0.00 1.284±0.00 0.810±0.00 N/A 1.647±0.09 N/A 2.492±0.29
ENST00000553362 36.549±0.00 39.356±0.00 N/A 15.719±0.00 25.681±13.53 38.411±0.00 N/A 33.418±0.00 12.720±0.00 19.031±0.00 N/A N/A N/A 58.047±0.00
ENST00000553479 N/A N/A 6.403±0.00 19.615±0.00 N/A 24.855±0.00 N/A 10.189±0.00 9.621±0.00 N/A 19.908±0.00 58.355±0.00 N/A 31.906±0.00
ENST00000556760 32.936±0.00 27.514±0.00 4.128±0.00 13.942±0.45 24.291±10.77 24.106±10.00 36.398±24.52 28.970±19.56 17.631±5.04 26.654±14.93 70.214±0.00 49.398±18.96 52.102±10.63 53.155±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J1 CIL_0007J1_0002 CGP 14:51989475-52069228

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000993 IDA RNA polymerase II core binding
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006388 IMP tRNA splicing, via endonucleolytic cleavage and ligation
GO:0015629 IDA actin cytoskeleton
GO:0016032 IEA viral process
GO:0042802 IPI identical protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0050658 TAS RNA transport
GO:0072669 IDA tRNA-splicing ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009253 C17H14orf166 chromosome 14 open reading frame 166 protein_coding Danio_rerio
ENSMUSG00000021807 2700060E02Rik RIKEN cDNA 2700060E02 gene protein_coding Mus_musculus

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