C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 14 open reading frame 166
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261700 C14orf166-001 ENSG00000087302 9606 + 14:51989475-52010691 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000261700
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000261700 2.112±0.00 0.348±0.00 1.741±0.33 1.033±0.00 1.604±0.00 0.785±0.00 0.662±0.00 1.284±0.00 0.810±0.00 1.647±0.09 2.492±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J1 CIL_0007J1_0002 CGP 14:51989475-52069228

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000993 IDA RNA polymerase II core binding
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006388 IMP tRNA splicing, via endonucleolytic cleavage and ligation
GO:0015629 IDA actin cytoskeleton
GO:0016032 IEA viral process
GO:0042802 IPI identical protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0050658 TAS RNA transport
GO:0072669 IDA tRNA-splicing ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022341 2700060E02Rik-201 protein_coding Mus_musculus 0 1242
ENSMUST00000098952 Gm10704-201 protein_coding Mus_musculus 0 1016
ENSMUST00000022340 Nid2-201 protein_coding Mus_musculus 0 235
ENSMUST00000094805 Ccdc8-001 protein_coding Mus_musculus 0.0001 55

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