C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: G patch domain containing 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000089916 GPATCH2L 9606 + 14:76151916-76254342 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261530 GPATCH2L-003 76151936-76214343 protein_coding
  ENST00000312858 GPATCH2L-014 76151935-76202788 protein_coding
  ENST00000553588 GPATCH2L-010 76180782-76196585 protein_coding
  ENST00000554125 GPATCH2L-001 76151934-76180022 retained_intron
  ENST00000554375 GPATCH2L-004 76151916-76202007 nonsense_mediated_decay
  ENST00000554799 GPATCH2L-006 76170596-76195987 protein_coding
  ENST00000556109 GPATCH2L-008 76151919-76154978 protein_coding
  ENST00000556372 GPATCH2L-013 76195908-76254342 nonsense_mediated_decay
  ENST00000556663 GPATCH2L-002 76153646-76174035 protein_coding
  ENST00000556675 GPATCH2L-012 76180815-76234926 processed_transcript
  ENST00000557207 GPATCH2L-009 76151930-76153002 protein_coding
  ENST00000557263 GPATCH2L-005 76151922-76174035 protein_coding
  ENST00000557542 GPATCH2L-007 76151919-76154681 protein_coding
  ENST00000621494 GPATCH2L-201 76154354-76212803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261530ENST00000312858ENST00000554125ENST00000554375ENST00000557263ENST00000621494
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261530 N/A 1.465±0.00 0.409±0.00 1.133±0.00 1.169±0.34 1.058±0.30 0.500±0.22 N/A 1.056±0.69 0.679±0.24 0.579±0.00 0.554±0.00 0.485±0.06 N/A
ENST00000312858 N/A N/A N/A N/A N/A N/A 1.037±0.00 N/A N/A 2.050±0.00 1.819±0.00 N/A 0.948±0.00 N/A
ENST00000554125 N/A N/A 0.795±0.00 0.852±0.00 N/A 0.855±0.00 0.430±0.00 N/A 1.827±0.00 1.688±0.00 N/A 1.748±0.00 N/A N/A
ENST00000554375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.657±0.00 N/A 1.504±0.02 N/A
ENST00000557263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.953±0.00 2.440±0.00 18.305±0.00
ENST00000621494 0.870±0.00 N/A 0.923±0.00 1.260±0.00 1.448±0.00 1.153±0.00 0.448±0.16 0.399±0.00 1.991±0.00 1.276±0.27 1.056±0.37 0.741±0.12 0.334±0.18 3.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007M1 CIL_0007M1_0001 UCNEbase 14:76034985-76675411
CIL_0005O2 CIL_0005O2_0001 CGP 14:76151916-76501841

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000021254 Gpatch2l G patch domain containing 2 like protein_coding Mus_musculus

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