C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin K
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000090061 CCNK 9606 + 14:99481169-99535044 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389879 CCNK-001 99481409-99512440 protein_coding
  ENST00000553636 CCNK-007 99481412-99493103 retained_intron
  ENST00000553865 CCNK-005 99493970-99511514 retained_intron
  ENST00000555049 CCNK-003 99481424-99535044 protein_coding
  ENST00000555842 CCNK-008 99481425-99495547 protein_coding
  ENST00000555942 CCNK-010 99493514-99495628 processed_transcript
  ENST00000556641 CCNK-009 99481450-99501019 retained_intron
  ENST00000557165 CCNK-004 99481169-99502376 processed_transcript
  ENST00000557441 CCNK-006 99481412-99502312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000553865ENST00000555049ENST00000556641ENST00000557441
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000553865 N/A N/A N/A N/A 0.754±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000555049 6.166±0.00 7.118±0.00 4.929±0.00 3.885±0.41 N/A N/A 5.572±0.00 10.556±0.00 6.441±0.00 5.721±3.67 4.128±1.05 11.125±0.00
ENST00000556641 N/A N/A 2.135±0.00 N/A N/A 1.812±0.00 N/A N/A N/A N/A N/A N/A
ENST00000557441 7.044±0.00 N/A N/A N/A N/A N/A N/A N/A 1.332±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0001 VISTA 14:99273315-99877989
CIL_0003HD CIL_0003HD_0001 CGP 14:99397746-99535044
CIL_0003HE CIL_0003HE_0001 CGP 14:99481169-99604026

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0001701 IEA in utero embryonic development
GO:0002944 IPI cyclin K-CDK12 complex
GO:0002945 IPI cyclin K-CDK13 complex
GO:0004693 IDA cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006468 IDA protein phosphorylation
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0007067 IEA mitotic nuclear division
GO:0008353 IDA RNA polymerase II carboxy-terminal domain kinase activity
GO:0019901 IEA:IPI protein kinase binding
GO:0071157 IGI negative regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034146 ccnk cyclin K protein_coding Danio_rerio
ENSMUSG00000021258 Ccnk cyclin K protein_coding Mus_musculus

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