C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-acetylglucosamine-1-phosphate transferase, gamma subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000090581 GNPTG 9606 + 16:1351923-1364113 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000204679 GNPTG-001 1351923-1364113 protein_coding
  ENST00000526820 GNPTG-004 1351931-1362124 nonsense_mediated_decay
  ENST00000527076 GNPTG-003 1360623-1363350 retained_intron
  ENST00000527137 GNPTG-008 1351951-1352499 protein_coding
  ENST00000527168 GNPTG-002 1351954-1363323 retained_intron
  ENST00000527876 GNPTG-006 1351944-1358417 nonsense_mediated_decay
  ENST00000529110 GNPTG-009 1351983-1362279 protein_coding
  ENST00000529957 GNPTG-007 1351946-1362906 retained_intron
  ENST00000534197 GNPTG-005 1351948-1357844 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000204679ENST00000527168ENST00000529110ENST00000529957
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000204679 N/A N/A 1.661±0.00 1.763±0.00 0.609±0.00 N/A 1.495±0.00 N/A N/A N/A 2.596±1.81 N/A N/A
ENST00000527168 7.738±0.00 0.992±0.00 30.701±0.00 21.618±0.00 4.120±2.73 N/A N/A 3.475±0.00 N/A 5.957±0.00 14.313±13.11 23.274±7.03 8.054±0.00
ENST00000529110 N/A 4.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529957 N/A 2.635±0.00 N/A 25.185±0.00 2.640±0.00 3.003±0.00 N/A N/A 1.525±0.00 N/A 19.607±8.93 24.544±0.00 24.397±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FR CIL_0003FR_0002 CGP 16:1349240-1364113

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003976 IEA UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity
GO:0005794 ISS Golgi apparatus
GO:0016020 IEA membrane
GO:0016256 IEA N-glycan processing to lysosome
GO:0042803 ISS protein homodimerization activity
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046835 IDA carbohydrate phosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038566 gnptg N-acetylglucosamine-1-phosphate transferase, gamma subunit protein_coding Danio_rerio
ENSMUSG00000035521 Gnptg N-acetylglucosamine-1-phosphotransferase, gamma subunit protein_coding Mus_musculus

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