C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003FR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038567-ENSDARG00000038566 CGP 7955 24:38842181-38860920
GeneTranscriptPositionBiotype
ENSDARG00000038566 (gnptg)
N-acetylglucosamine-1-phosphate transferase, gamma subunit 		ENSDART00000141771 (gnptg-001) 38851231-38860920 protein_coding
ENSDARG00000038567 (tsr3)
TSR3, 20S rRNA accumulation, homolog (S. cerevisiae) 		ENSDART00000056303 (tsr3-001) 38842181-38851224 protein_coding
ENSDART00000146844 (tsr3-002) 38842701-38851801 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003FR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000007520-ENSG00000090581 CGP 9606 16:1349240-1364113
GeneTranscriptPositionBiotype
ENSG00000007516 (BAIAP3)
BAI1-associated protein 3 		ENST00000324385 (BAIAP3-001) 1334504-1349438 protein_coding
ENST00000397488 (BAIAP3-002) 1333643-1349438 protein_coding
ENST00000421665 (BAIAP3-007) 1336197-1348793 protein_coding
ENST00000426824 (BAIAP3-004) 1333601-1348794 protein_coding
ENST00000561602 (BAIAP3-010) 1345418-1346225 retained_intron
ENST00000561793 (BAIAP3-011) 1346009-1347610 protein_coding
ENST00000562208 (BAIAP3-005) 1333645-1348640 protein_coding
ENST00000564213 (BAIAP3-012) 1346238-1347358 processed_transcript
ENST00000565665 (BAIAP3-008) 1333638-1339386 retained_intron
ENST00000566162 (BAIAP3-015) 1344668-1349438 protein_coding
ENST00000566389 (BAIAP3-014) 1346719-1348301 retained_intron
ENST00000567203 (BAIAP3-013) 1346459-1347091 retained_intron
ENST00000567825 (BAIAP3-006) 1334504-1342421 retained_intron
ENST00000568198 (BAIAP3-009) 1343318-1345073 retained_intron
ENST00000568887 (BAIAP3-003) 1333645-1348755 protein_coding
ENSG00000007520 (TSR3)
TSR3, 20S rRNA accumulation, homolog (S. cerevisiae) 		ENST00000007390 (TSR3-001) 1349240-1351911 protein_coding
ENST00000566296 (TSR3-002) 1349426-1351473 nonsense_mediated_decay
ENSG00000059145 (UNKL)
unkempt family zinc finger-like 		ENST00000248104 (UNKL-201) 1363205-1379683 protein_coding
ENST00000301712 (UNKL-001) 1398305-1414751 protein_coding
ENST00000382757 (UNKL-004) 1394131-1414697 nonsense_mediated_decay
ENST00000389221 (UNKL-202) 1363205-1414720 protein_coding
ENST00000397464 (UNKL-009) 1364999-1379683 protein_coding
ENST00000402641 (UNKL-019) 1367292-1379680 protein_coding
ENST00000403703 (UNKL-008) 1363206-1379645 nonsense_mediated_decay
ENST00000502438 (UNKL-006) 1399140-1403190 retained_intron
ENST00000503648 (UNKL-005) 1401337-1414695 processed_transcript
ENST00000508903 (UNKL-002) 1365012-1414691 protein_coding
ENST00000509981 (UNKL-007) 1397045-1399508 retained_intron
ENST00000511095 (UNKL-012) 1366278-1368203 retained_intron
ENST00000513783 (UNKL-010) 1367713-1379121 protein_coding
ENST00000515195 (UNKL-013) 1370233-1379176 processed_transcript
ENST00000561783 (UNKL-018) 1403237-1407341 processed_transcript
ENST00000562537 (UNKL-016) 1364174-1366148 processed_transcript
ENST00000566707 (UNKL-017) 1403208-1414078 retained_intron
ENSG00000090581 (GNPTG)
N-acetylglucosamine-1-phosphate transferase, gamma subunit 		ENST00000204679 (GNPTG-001) 1351923-1364113 protein_coding
ENST00000526820 (GNPTG-004) 1351931-1362124 nonsense_mediated_decay
ENST00000527076 (GNPTG-003) 1360623-1363350 retained_intron
ENST00000527137 (GNPTG-008) 1351951-1352499 protein_coding
ENST00000527168 (GNPTG-002) 1351954-1363323 retained_intron
ENST00000527876 (GNPTG-006) 1351944-1358417 nonsense_mediated_decay
ENST00000529110 (GNPTG-009) 1351983-1362279 protein_coding
ENST00000529957 (GNPTG-007) 1351946-1362906 retained_intron
ENST00000534197 (GNPTG-005) 1351948-1357844 retained_intron

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003FR_0001ENSDARG00000038566ENSDART00000141771ENSDARG00000038567ENSDART00000056303ENSDART00000146844CIL_0003FR_0002ENSG00000007516ENST00000324385ENST00000397488ENST00000421665ENST00000426824ENST00000561602ENST00000561793ENST00000562208ENST00000564213ENST00000565665ENST00000566162ENST00000566389ENST00000567203ENST00000567825ENST00000568198ENST00000568887ENSG00000007520ENST00000007390ENST00000566296ENSG00000059145ENST00000248104ENST00000301712ENST00000382757ENST00000389221ENST00000397464ENST00000402641ENST00000403703ENST00000502438ENST00000503648ENST00000508903ENST00000509981ENST00000511095ENST00000513783ENST00000515195ENST00000561783ENST00000562537ENST00000566707ENSG00000090581ENST00000204679ENST00000526820ENST00000527076ENST00000527137ENST00000527168ENST00000527876ENST00000529110ENST00000529957ENST00000534197
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003FR_0001ENSDARG00000038566ENSDART00000141771ENSDARG00000038567ENSDART00000056303ENSDART00000146844CIL_0003FR_0002ENSG00000007516ENST00000324385ENST00000397488ENST00000566389ENSG00000007520ENST00000007390ENST00000566296ENSG00000059145ENST00000248104ENST00000301712ENST00000389221ENST00000403703ENSG00000090581ENST00000204679ENST00000527168ENST00000529110ENST00000529957
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038566 ENSDART00000141771 N/A N/A N/A 6.700±3.04 N/A N/A 7.933±1.21 6.848±6.25 1.500±0.00 N/A 7.113±0.00 N/A N/A N/A
ENSDARG00000038567 ENSDART00000056303 N/A N/A N/A 4.370±0.89 N/A N/A 4.929±2.90 2.663±2.21 1.478±0.00 N/A 5.199±0.00 N/A N/A N/A
ENSDART00000146844 N/A N/A N/A 2.793±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007516 ENST00000324385 N/A N/A N/A 2.411±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397488 1.236±0.00 N/A N/A 17.856±0.00 N/A 1.028±0.00 N/A 1.975±0.00 N/A N/A N/A N/A N/A 6.834±1.77
ENST00000421665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566389 N/A N/A 1.098±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 52.364±0.00
ENST00000567203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000007520 ENST00000007390 27.076±0.00 40.620±0.00 2.286±0.00 23.162±12.11 23.040±16.48 15.955±12.39 15.931±11.89 21.935±18.65 14.425±7.93 15.347±11.38 16.235±5.22 28.883±18.28 40.950±14.53 37.812±6.11
ENST00000566296 10.906±0.00 17.772±0.00 N/A N/A 23.945±0.00 12.480±0.00 N/A N/A N/A N/A N/A 12.182±0.00 N/A N/A
ENSG00000059145 ENST00000248104 N/A N/A N/A 2.666±0.00 3.042±0.00 N/A N/A N/A N/A N/A N/A 1.172±0.00 N/A N/A
ENST00000301712 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.080±0.00 N/A N/A N/A N/A
ENST00000382757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389221 N/A 3.251±0.00 0.554±0.00 N/A 2.046±1.45 1.883±0.00 0.704±0.33 1.790±0.00 1.292±0.00 1.102±0.69 N/A 2.421±1.42 N/A 2.147±0.00
ENST00000397464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403703 N/A N/A N/A N/A 0.308±0.00 N/A 0.658±0.40 N/A N/A N/A N/A N/A 3.029±0.00 3.466±0.00
ENST00000502438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000090581 ENST00000204679 N/A N/A N/A 1.661±0.00 1.763±0.00 0.609±0.00 N/A 1.495±0.00 N/A N/A N/A 2.596±1.81 N/A N/A
ENST00000526820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527168 7.738±0.00 N/A 0.992±0.00 30.701±0.00 21.618±0.00 4.120±2.73 N/A N/A 3.475±0.00 N/A 5.957±0.00 14.313±13.11 23.274±7.03 8.054±0.00
ENST00000527876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529110 N/A N/A 4.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529957 N/A N/A 2.635±0.00 N/A 25.185±0.00 2.640±0.00 3.003±0.00 N/A N/A 1.525±0.00 N/A 19.607±8.93 24.544±0.00 24.397±0.00
ENST00000534197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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