C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell division cycle 45
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000093009 CDC45 9606 + 22:19479459-19520612 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263201 CDC45-201 19479826-19520611 protein_coding
  ENST00000404724 CDC45-002 19479938-19520578 protein_coding
  ENST00000407835 CDC45-001 19479459-19520612 protein_coding
  ENST00000428937 CDC45-008 19482751-19505370 nonsense_mediated_decay
  ENST00000437685 CDC45-202 19479826-19520611 protein_coding
  ENST00000438587 CDC45-003 19479482-19494353 protein_coding
  ENST00000455750 CDC45-004 19479738-19482822 protein_coding
  ENST00000471470 CDC45-009 19505054-19514784 retained_intron
  ENST00000483431 CDC45-007 19479901-19495986 processed_transcript
  ENST00000487669 CDC45-006 19480150-19497444 retained_intron
  ENST00000491520 CDC45-005 19479738-19483873 retained_intron
  ENST00000493724 CDC45-010 19516434-19520594 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000263201ENST00000404724ENST00000407835ENST00000428937ENST00000438587ENST00000455750ENST00000471470ENST00000483431ENST00000493724
Transcript ID Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000263201 N/A 0.323±0.00 0.115±0.00 N/A N/A N/A N/A 5.280±6.75 2.191±1.65 5.006±1.88
ENST00000404724 N/A N/A 1.135±0.00 0.135±0.00 0.318±0.00 0.083±0.00 N/A 1.232±0.00 1.271±0.61 6.850±0.00
ENST00000407835 N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.152±4.41
ENST00000428937 N/A N/A N/A N/A 0.282±0.00 N/A 0.027±0.00 0.163±0.00 N/A N/A
ENST00000438587 N/A N/A 3.038±0.00 0.078±0.00 N/A 0.161±0.00 N/A N/A 2.525±0.00 N/A
ENST00000455750 0.379±0.00 N/A N/A N/A N/A N/A N/A 2.086±1.93 N/A N/A
ENST00000471470 N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENST00000483431 N/A 1.170±0.00 N/A N/A 0.444±0.00 N/A N/A 1.866±0.00 N/A N/A
ENST00000493724 N/A N/A N/A N/A N/A N/A N/A 20.334±16.93 5.974±0.00 34.924±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000076 TAS DNA replication checkpoint
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000083 TAS regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0006260 TAS DNA replication
GO:0006270 IEA DNA replication initiation
GO:0006271 TAS DNA strand elongation involved in DNA replication

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043720 cdc45 CDC45 cell division cycle 45 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000000028 Cdc45 cell division cycle 45 protein_coding Mus_musculus

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