C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263201 CDC45-201 ENSG00000093009 9606 + 22:19479826-19520611 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryPlacentaTestisENST00000263201
Transcript ID Breast Colon Ovary Placenta Testis
ENST00000263201 0.323±0.00 0.115±0.00 5.280±6.75 2.191±1.65 5.006±1.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BW CIL_0008BW_0001 VISTA 22:19453681-20054184
CIL_00099J CIL_00099J_0001 VISTA 22:19461833-20062532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000076 TAS DNA replication checkpoint
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000083 TAS regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005813 IDA centrosome
GO:0006260 TAS DNA replication
GO:0006270 IEA DNA replication initiation
GO:0006271 TAS DNA strand elongation involved in DNA replication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000028 Cdc45-001 protein_coding Mus_musculus 0 2113
ENSMUST00000096990 Cdc45-003 protein_coding Mus_musculus 0 1652
ENSMUST00000115585 Cdc45-002 protein_coding Mus_musculus 0 544

Loading