C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat (in FLII) interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000093167 LRRFIP2 9606 - 3:37052656-37183689 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336686 LRRFIP2-001 37052890-37174564 protein_coding
  ENST00000354379 LRRFIP2-002 37052656-37176360 protein_coding
  ENST00000396428 LRRFIP2-006 37053721-37175189 protein_coding
  ENST00000416425 LRRFIP2-012 37075024-37176532 protein_coding
  ENST00000421276 LRRFIP2-003 37053004-37176337 protein_coding
  ENST00000434749 LRRFIP2-019 37129063-37175135 protein_coding
  ENST00000436858 LRRFIP2-018 37129063-37175209 protein_coding
  ENST00000438374 LRRFIP2-021 37121666-37176251 protein_coding
  ENST00000440230 LRRFIP2-004 37053750-37176308 protein_coding
  ENST00000440742 LRRFIP2-023 37058859-37083750 protein_coding
  ENST00000452742 LRRFIP2-017 37129063-37175215 protein_coding
  ENST00000460646 LRRFIP2-010 37053004-37065334 retained_intron
  ENST00000461672 LRRFIP2-011 37121464-37183689 retained_intron
  ENST00000481682 LRRFIP2-022 37083645-37111915 processed_transcript
  ENST00000482466 LRRFIP2-016 37148927-37176057 processed_transcript
  ENST00000483306 LRRFIP2-014 37174119-37176327 processed_transcript
  ENST00000487246 LRRFIP2-024 37063742-37066684 retained_intron
  ENST00000490597 LRRFIP2-020 37170333-37176302 processed_transcript
  ENST00000496479 LRRFIP2-009 37053687-37068763 retained_intron
  ENST00000496825 LRRFIP2-013 37172770-37176144 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336686ENST00000354379ENST00000396428ENST00000416425ENST00000421276ENST00000440230ENST00000452742ENST00000460646ENST00000487246ENST00000496479
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336686 N/A N/A N/A N/A N/A N/A 12.474±0.00 N/A N/A N/A 5.279±1.96 N/A N/A N/A
ENST00000354379 N/A N/A 0.787±0.00 1.760±0.00 2.602±0.00 5.338±0.00 N/A N/A N/A N/A N/A 2.291±0.97 N/A N/A
ENST00000396428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.189±6.03
ENST00000416425 N/A N/A 2.451±0.00 N/A N/A N/A N/A N/A 3.814±0.00 N/A N/A N/A N/A N/A
ENST00000421276 8.234±0.00 7.222±0.00 N/A 5.984±3.08 9.827±0.00 11.910±0.00 N/A 5.175±1.03 7.276±4.87 7.877±3.41 N/A 4.089±1.84 5.997±1.60 8.237±0.00
ENST00000440230 5.914±0.00 N/A N/A N/A 3.148±0.00 6.063±2.76 10.054±0.00 4.628±0.00 2.200±0.00 7.569±4.94 3.874±0.00 9.002±7.51 20.230±0.00 31.031±8.88
ENST00000452742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.844±0.00 N/A N/A N/A
ENST00000460646 N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487246 N/A N/A 11.295±0.00 N/A 18.500±0.00 N/A N/A N/A N/A N/A 21.558±0.00 N/A N/A N/A
ENST00000496479 N/A 2.314±0.00 N/A 3.372±0.00 2.190±0.23 3.589±0.00 N/A 2.246±0.00 1.708±0.00 2.644±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041G CIL_00041G_0002 CGP 3:36993332-37183689

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016055 IEA Wnt signaling pathway
GO:0030275 IPI LRR domain binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010400 lrrfip2 leucine rich repeat (in FLII) interacting protein 2 protein_coding Danio_rerio
ENSMUSG00000032497 Lrrfip2 leucine rich repeat (in FLII) interacting protein 2 protein_coding Mus_musculus

Loading