C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00041G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000025948-ENSDARG00000010400 CGP 7955 13:43255387-43326974
GeneTranscriptPositionBiotype
ENSDARG00000010400 (lrrfip2)
leucine rich repeat (in FLII) interacting protein 2 		ENSDART00000022154 (lrrfip2-201) 43275083-43325833 protein_coding
ENSDART00000099729 (lrrfip2-005) 43301804-43326974 protein_coding
ENSDART00000099738 (lrrfip2-001) 43274186-43326970 protein_coding
ENSDART00000133848 (lrrfip2-003) 43289671-43326959 protein_coding
ENSDART00000141115 (lrrfip2-004) 43277640-43279938 retained_intron
ENSDART00000145745 (lrrfip2-002) 43278753-43325772 nonsense_mediated_decay
ENSDARG00000025948 (mlh1)
mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) 		ENSDART00000133388 (mlh1-001) 43255387-43270620 protein_coding
ENSDART00000147996 (mlh1-002) 43255390-43259892 protein_coding
CIL_00041G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000076242-ENSG00000093167 CGP 9606 3:36993332-37183689
GeneTranscriptPositionBiotype
ENSG00000076242 (MLH1)
mutL homolog 1 		ENST00000231790 (MLH1-001) 36993332-37050918 protein_coding
ENST00000413212 (MLH1-009) 37014432-37040236 nonsense_mediated_decay
ENST00000413740 (MLH1-011) 37025976-37050537 protein_coding
ENST00000429117 (MLH1-016) 36993826-37008904 protein_coding
ENST00000432299 (MLH1-002) 36993524-37012099 nonsense_mediated_decay
ENST00000435176 (MLH1-006) 36993804-37050844 protein_coding
ENST00000441265 (MLH1-020) 36993804-37020463 protein_coding
ENST00000442249 (MLH1-013) 36993533-37012056 nonsense_mediated_decay
ENST00000447829 (MLH1-007) 37012042-37025919 nonsense_mediated_decay
ENST00000450420 (MLH1-010) 37025976-37050537 protein_coding
ENST00000454028 (MLH1-018) 36993534-37011840 nonsense_mediated_decay
ENST00000455445 (MLH1-005) 36993798-37050706 protein_coding
ENST00000456676 (MLH1-003) 36993573-37050844 protein_coding
ENST00000457004 (MLH1-012) 36993516-37014494 nonsense_mediated_decay
ENST00000458009 (MLH1-008) 37012082-37028847 nonsense_mediated_decay
ENST00000458205 (MLH1-004) 36993776-37050846 protein_coding
ENST00000466900 (MLH1-019) 36993848-37008882 processed_transcript
ENST00000476172 (MLH1-014) 36993777-37001054 processed_transcript
ENST00000485889 (MLH1-017) 36994227-37011836 processed_transcript
ENST00000492474 (MLH1-015) 36993826-37011840 processed_transcript
ENST00000536378 (MLH1-201) 36993350-37050842 protein_coding
ENST00000539477 (MLH1-202) 36993777-37050842 protein_coding
ENST00000616768 (MLH1-021) 37025831-37047740 protein_coding
ENSG00000093167 (LRRFIP2)
leucine rich repeat (in FLII) interacting protein 2 		ENST00000336686 (LRRFIP2-001) 37052890-37174564 protein_coding
ENST00000354379 (LRRFIP2-002) 37052656-37176360 protein_coding
ENST00000396428 (LRRFIP2-006) 37053721-37175189 protein_coding
ENST00000416425 (LRRFIP2-012) 37075024-37176532 protein_coding
ENST00000421276 (LRRFIP2-003) 37053004-37176337 protein_coding
ENST00000434749 (LRRFIP2-019) 37129063-37175135 protein_coding
ENST00000436858 (LRRFIP2-018) 37129063-37175209 protein_coding
ENST00000438374 (LRRFIP2-021) 37121666-37176251 protein_coding
ENST00000440230 (LRRFIP2-004) 37053750-37176308 protein_coding
ENST00000440742 (LRRFIP2-023) 37058859-37083750 protein_coding
ENST00000452742 (LRRFIP2-017) 37129063-37175215 protein_coding
ENST00000460646 (LRRFIP2-010) 37053004-37065334 retained_intron
ENST00000461672 (LRRFIP2-011) 37121464-37183689 retained_intron
ENST00000481682 (LRRFIP2-022) 37083645-37111915 processed_transcript
ENST00000482466 (LRRFIP2-016) 37148927-37176057 processed_transcript
ENST00000483306 (LRRFIP2-014) 37174119-37176327 processed_transcript
ENST00000487246 (LRRFIP2-024) 37063742-37066684 retained_intron
ENST00000490597 (LRRFIP2-020) 37170333-37176302 processed_transcript
ENST00000496479 (LRRFIP2-009) 37053687-37068763 retained_intron
ENST00000496825 (LRRFIP2-013) 37172770-37176144 processed_transcript
ENSG00000199594 (RNU6-1301P)
RNA, U6 small nuclear 1301, pseudogene 		ENST00000362724 (RNU6-1301P-201) 37140327-37140430 snRNA
ENSG00000206645 (Y_RNA)
Y RNA 		ENST00000383918 (Y_RNA.1-589) 37093133-37093234 misc_RNA
ENSG00000224080 (UBE2FP1)
ubiquitin-conjugating enzyme E2F (putative) pseudogene 1 		ENST00000416536 (UBE2FP1-001) 37143512-37143958 processed_pseudogene
ENSG00000224858 (RPL29P11)
ribosomal protein L29 pseudogene 11 		ENST00000494408 (RPL29P11-001) 37016523-37017014 processed_pseudogene
ENSG00000225558 (UBE2D3P2)
ubiquitin-conjugating enzyme E2D 3 pseudogene 2 		ENST00000424409 (UBE2D3P2-001) 37134658-37135102 processed_pseudogene
ENSG00000271993 (RP11-285J16.1)
 ENST00000607744 (RP11-285J16.1-001) 37182107-37182734 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041G_0001ENSDARG00000010400ENSDART00000022154ENSDART00000099729ENSDART00000099738ENSDART00000133848ENSDART00000141115ENSDART00000145745ENSDARG00000025948ENSDART00000133388ENSDART00000147996CIL_00041G_0002ENSG00000076242ENST00000231790ENST00000413212ENST00000413740ENST00000429117ENST00000432299ENST00000435176ENST00000441265ENST00000442249ENST00000447829ENST00000450420ENST00000454028ENST00000455445ENST00000456676ENST00000457004ENST00000458009ENST00000458205ENST00000466900ENST00000476172ENST00000485889ENST00000492474ENST00000536378ENST00000539477ENST00000616768ENSG00000093167ENST00000336686ENST00000354379ENST00000396428ENST00000416425ENST00000421276ENST00000434749ENST00000436858ENST00000438374ENST00000440230ENST00000440742ENST00000452742ENST00000460646ENST00000461672ENST00000481682ENST00000482466ENST00000483306ENST00000487246ENST00000490597ENST00000496479ENST00000496825ENSG00000199594ENST00000362724ENSG00000206645ENST00000383918ENSG00000224080ENST00000416536ENSG00000224858ENST00000494408ENSG00000225558ENST00000424409ENSG00000271993ENST00000607744
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041G_0001ENSDARG00000010400ENSDART00000022154ENSDART00000099729ENSDART00000099738ENSDART00000133848ENSDARG00000025948ENSDART00000133388ENSDART00000147996CIL_00041G_0002ENSG00000076242ENST00000231790ENST00000432299ENST00000435176ENST00000442249ENST00000455445ENST00000456676ENST00000466900ENST00000536378ENST00000539477ENST00000616768ENSG00000093167ENST00000336686ENST00000354379ENST00000396428ENST00000416425ENST00000421276ENST00000440230ENST00000452742ENST00000460646ENST00000487246ENST00000496479ENSG00000199594ENST00000362724ENSG00000206645ENST00000383918ENSG00000224080ENST00000416536ENSG00000224858ENST00000494408ENSG00000225558ENST00000424409ENSG00000271993ENST00000607744
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010400 ENSDART00000022154 N/A N/A N/A N/A N/A N/A 8.433±2.66 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000099729 N/A N/A N/A N/A N/A N/A 5.705±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000099738 N/A N/A N/A 2.387±1.01 N/A N/A 19.234±6.46 6.709±2.48 0.802±0.00 N/A N/A N/A N/A N/A
ENSDART00000133848 N/A N/A N/A N/A N/A N/A N/A N/A 0.725±0.00 N/A N/A N/A N/A N/A
ENSDART00000141115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000025948 ENSDART00000133388 N/A N/A N/A 1.783±0.87 N/A N/A 1.283±0.00 0.927±0.00 0.239±0.00 N/A N/A N/A N/A N/A
ENSDART00000147996 N/A N/A N/A 3.254±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000076242 ENST00000231790 N/A N/A 1.311±0.00 1.807±0.82 4.664±0.00 3.191±0.00 2.609±0.76 1.071±0.07 5.527±0.00 2.057±0.00 4.759±0.00 3.667±0.69 4.867±1.13 8.562±0.00
ENST00000413212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432299 N/A N/A 0.855±0.00 3.162±0.00 N/A N/A N/A 1.624±0.00 N/A 3.285±0.00 N/A 2.398±0.00 N/A N/A
ENST00000435176 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.754±0.00 3.015±0.00 2.394±1.16 3.345±0.34 N/A
ENST00000441265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442249 N/A N/A N/A N/A N/A N/A N/A 3.257±0.00 N/A N/A N/A N/A N/A N/A
ENST00000447829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455445 3.089±0.00 5.990±0.00 N/A 4.011±0.00 2.490±0.00 2.836±0.00 7.352±0.00 4.330±0.00 2.277±0.00 N/A 3.334±0.00 1.344±0.00 N/A 8.398±0.00
ENST00000456676 1.996±0.00 N/A N/A N/A 1.397±0.00 N/A N/A N/A N/A 1.046±0.00 N/A N/A 1.682±0.00 4.161±0.00
ENST00000457004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466900 N/A N/A 2.884±0.00 N/A N/A N/A N/A 3.416±0.00 N/A N/A N/A N/A N/A N/A
ENST00000476172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536378 N/A 2.350±0.00 N/A 1.098±0.00 1.770±0.00 2.658±0.00 2.545±0.00 N/A 1.984±0.00 2.451±0.00 N/A N/A N/A 5.159±0.00
ENST00000539477 1.005±0.00 3.103±0.00 N/A 1.278±0.00 2.869±0.00 1.478±0.00 2.422±0.00 1.973±0.00 1.810±0.00 N/A 1.935±0.00 1.361±0.00 N/A 3.978±0.00
ENST00000616768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.918±0.00 12.597±0.00 28.670±0.00
ENSG00000093167 ENST00000336686 N/A N/A N/A N/A N/A N/A 12.474±0.00 N/A N/A N/A 5.279±1.96 N/A N/A N/A
ENST00000354379 N/A N/A 0.787±0.00 1.760±0.00 2.602±0.00 5.338±0.00 N/A N/A N/A N/A N/A 2.291±0.97 N/A N/A
ENST00000396428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.189±6.03
ENST00000416425 N/A N/A 2.451±0.00 N/A N/A N/A N/A N/A 3.814±0.00 N/A N/A N/A N/A N/A
ENST00000421276 8.234±0.00 7.222±0.00 N/A 5.984±3.08 9.827±0.00 11.910±0.00 N/A 5.175±1.03 7.276±4.87 7.877±3.41 N/A 4.089±1.84 5.997±1.60 8.237±0.00
ENST00000434749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440230 5.914±0.00 N/A N/A N/A 3.148±0.00 6.063±2.76 10.054±0.00 4.628±0.00 2.200±0.00 7.569±4.94 3.874±0.00 9.002±7.51 20.230±0.00 31.031±8.88
ENST00000440742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.844±0.00 N/A N/A N/A
ENST00000460646 N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487246 N/A N/A 11.295±0.00 N/A 18.500±0.00 N/A N/A N/A N/A N/A 21.558±0.00 N/A N/A N/A
ENST00000490597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496479 N/A 2.314±0.00 N/A 3.372±0.00 2.190±0.23 3.589±0.00 N/A 2.246±0.00 1.708±0.00 2.644±0.00 N/A N/A N/A N/A
ENST00000496825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199594 ENST00000362724 0.780±0.00 N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A
ENSG00000206645 ENST00000383918 N/A N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000224080 ENST00000416536 0.291±0.00 1.300±0.00 1.987±0.00 0.562±0.43 1.207±0.28 0.722±0.65 0.515±0.00 0.301±0.12 0.359±0.17 0.447±0.10 N/A 0.965±0.29 0.584±0.44 0.521±0.26
ENSG00000224858 ENST00000494408 0.248±0.00 0.407±0.00 1.774±0.00 0.298±0.15 0.224±0.18 0.929±0.71 0.041±0.00 N/A 1.614±0.00 0.808±0.62 0.512±0.00 0.863±0.74 0.073±0.00 0.102±0.02
ENSG00000225558 ENST00000424409 N/A 0.116±0.00 N/A 0.121±0.00 1.583±0.00 N/A 0.027±0.00 0.754±0.61 N/A 0.961±0.00 0.051±0.00 N/A N/A 0.026±0.00
ENSG00000271993 ENST00000607744 N/A N/A N/A N/A 0.285±0.25 N/A N/A N/A N/A 0.011±0.00 N/A 0.383±0.08 0.127±0.00 0.289±0.00

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