C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: xylulokinase homolog (H. influenzae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000093217 XYLB 9606 + 3:38346760-38421348 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000207870 XYLB-001 38346779-38414976 protein_coding
  ENST00000424034 XYLB-002 38346808-38414976 nonsense_mediated_decay
  ENST00000427323 XYLB-003 38346760-38357158 protein_coding
  ENST00000472721 XYLB-006 38376921-38421348 processed_transcript
  ENST00000487569 XYLB-005 38366808-38370281 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000207870ENST00000424034ENST00000427323ENST00000472721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000207870 0.342±0.00 N/A 3.103±0.00 0.066±0.00 0.454±0.00 0.462±0.28 0.092±0.00 3.099±1.86 5.340±0.00 N/A N/A 0.695±0.52 0.404±0.14 0.508±0.09
ENST00000424034 N/A 0.317±0.00 N/A 0.174±0.00 N/A 0.148±0.00 0.007±0.00 N/A N/A 0.070±0.00 0.047±0.00 N/A 0.199±0.00 N/A
ENST00000427323 N/A 0.109±0.00 N/A 0.062±0.00 N/A 0.086±0.00 0.048±0.00 N/A N/A N/A 0.077±0.00 N/A N/A 0.146±0.00
ENST00000472721 1.186±0.00 0.913±0.00 N/A 0.863±0.00 2.044±0.00 N/A N/A 4.501±2.42 N/A N/A 0.131±0.00 1.689±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BE CIL_0008BE_0001 VISTA 3:38261144-38866061
CIL_0005W6 CIL_0005W6_0001 CGP 3:38346760-38493142

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004856 IDA xylulokinase activity
GO:0005524 IEA ATP binding
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0005997 IDA xylulose metabolic process
GO:0005998 TAS xylulose catabolic process
GO:0006091 TAS generation of precursor metabolites and energy
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor
GO:0042732 IEA D-xylose metabolic process
GO:0046835 IEA carbohydrate phosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043260 xylb xylulokinase homolog (H. influenzae) protein_coding Danio_rerio
ENSMUSG00000035769 Xylb xylulokinase homolog (H. influenzae) protein_coding Mus_musculus

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