C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005W6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000093217-ENSG00000114739 CGP 9606 3:38346760-38493142
GeneTranscriptPositionBiotype
ENSG00000093217 (XYLB)
xylulokinase homolog (H. influenzae) 		ENST00000207870 (XYLB-001) 38346779-38414976 protein_coding
ENST00000424034 (XYLB-002) 38346808-38414976 nonsense_mediated_decay
ENST00000427323 (XYLB-003) 38346760-38357158 protein_coding
ENST00000472721 (XYLB-006) 38376921-38421348 processed_transcript
ENST00000487569 (XYLB-005) 38366808-38370281 processed_transcript
ENSG00000114739 (ACVR2B)
activin A receptor, type IIB 		ENST00000352511 (ACVR2B-001) 38453851-38493142 protein_coding
ENST00000461232 (ACVR2B-003) 38473446-38483374 retained_intron
ENST00000465020 (ACVR2B-002) 38454319-38483373 retained_intron
ENSG00000229589 (ACVR2B-AS1)
ACVR2B antisense RNA 1 		ENST00000441531 (ACVR2B-AS1-001) 38451027-38454820 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005W6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035769-ENSMUSG00000061393 CGP 10090 9:119357381-119433501
GeneTranscriptPositionBiotype
ENSMUSG00000035769 (Xylb)
xylulokinase homolog (H. influenzae) 		ENSMUST00000039610 (Xylb-201) 119357381-119393797 protein_coding
ENSMUSG00000061393 (Acvr2b)
activin receptor IIB 		ENSMUST00000035093 (Acvr2b-201) 119402444-119433501 protein_coding
ENSMUST00000165044 (Acvr2b-202) 119402501-119433501 protein_coding
ENSMUSG00000070280 (Slc22a14)
solute carrier family 22 (organic cation transporter), member 14 		ENSMUST00000093775 (Slc22a14-001) 119169455-119190407 protein_coding
ENSMUST00000127794 (Slc22a14-002) 119180966-119190362 protein_coding
ENSMUST00000152061 (Slc22a14-003) 119169668-119173652 protein_coding
ENSMUST00000170400 (Slc22a14-201) 119169456-119365553 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W6_0001ENSG00000093217ENST00000207870ENST00000424034ENST00000427323ENST00000472721ENST00000487569ENSG00000114739ENST00000352511ENST00000461232ENST00000465020ENSG00000229589ENST00000441531CIL_0005W6_0002ENSMUSG00000035769ENSMUST00000039610ENSMUSG00000061393ENSMUST00000035093ENSMUST00000165044ENSMUSG00000070280ENSMUST00000093775ENSMUST00000127794ENSMUST00000152061ENSMUST00000170400
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W6_0001ENSG00000093217ENST00000207870ENST00000424034ENST00000427323ENST00000472721ENSG00000114739ENST00000352511ENST00000465020ENSG00000229589ENST00000441531CIL_0005W6_0002ENSMUSG00000035769ENSMUST00000039610ENSMUSG00000061393ENSMUST00000035093ENSMUST00000165044ENSMUSG00000070280ENSMUST00000093775ENSMUST00000127794ENSMUST00000152061ENSMUST00000170400
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000093217 ENST00000207870 0.342±0.00 N/A 3.103±0.00 0.066±0.00 0.454±0.00 0.462±0.28 0.092±0.00 3.099±1.86 5.340±0.00 N/A N/A 0.695±0.52 0.404±0.14 0.508±0.09
ENST00000424034 N/A 0.317±0.00 N/A 0.174±0.00 N/A 0.148±0.00 0.007±0.00 N/A N/A 0.070±0.00 0.047±0.00 N/A 0.199±0.00 N/A
ENST00000427323 N/A 0.109±0.00 N/A 0.062±0.00 N/A 0.086±0.00 0.048±0.00 N/A N/A N/A 0.077±0.00 N/A N/A 0.146±0.00
ENST00000472721 1.186±0.00 0.913±0.00 N/A 0.863±0.00 2.044±0.00 N/A N/A 4.501±2.42 N/A N/A 0.131±0.00 1.689±0.00 N/A N/A
ENST00000487569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000114739 ENST00000352511 1.027±0.00 0.346±0.00 N/A 0.646±0.50 0.950±0.28 0.636±0.00 0.436±0.27 0.446±0.34 0.710±0.05 0.458±0.30 1.044±0.72 0.868±0.41 1.076±0.48 2.298±0.38
ENST00000461232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.019±0.00 N/A N/A N/A
ENSG00000229589 ENST00000441531 0.634±0.00 0.373±0.00 0.155±0.00 0.368±0.18 0.639±0.01 0.491±0.22 0.242±0.10 0.112±0.00 0.517±0.35 0.225±0.06 1.525±1.19 0.476±0.39 0.154±0.04 0.526±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035769 ENSMUST00000039610 0.711±0.21 0.461±0.21 0.237±0.03 1.049±0.47 0.540±0.17 1.529±0.21 0.123±0.03 84.980±11.78 17.626±18.21 1.096±0.37 0.044±0.02 2.630±0.61 8.251±4.14 0.937±0.50
ENSMUSG00000061393 ENSMUST00000035093 0.874±0.00 0.519±0.10 N/A 2.483±0.00 0.461±0.33 1.081±0.41 0.386±0.07 0.855±0.42 0.272±0.16 0.786±0.00 0.690±0.00 1.846±0.71 N/A 0.240±0.00
ENSMUST00000165044 0.573±0.21 0.817±0.00 N/A 3.799±1.72 0.828±0.52 0.818±0.29 0.601±0.14 0.415±0.03 0.541±0.19 0.966±0.31 1.650±0.00 1.824±1.05 14.681±0.00 0.506±0.12
ENSMUSG00000070280 ENSMUST00000093775 N/A N/A 0.039±0.00 N/A 0.118±0.08 N/A 0.106±0.00 0.467±0.18 N/A N/A N/A 0.240±0.00 N/A 67.771±25.23
ENSMUST00000127794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.442±0.00 N/A 225.235±0.00
ENSMUST00000152061 0.342±0.00 N/A 0.121±0.00 N/A 0.271±0.14 N/A 0.181±0.08 0.461±0.10 0.075±0.03 0.413±0.00 0.056±0.00 0.201±0.06 0.082±0.06 N/A
ENSMUST00000170400 0.271±0.00 N/A 0.035±0.00 0.016±0.00 0.097±0.07 N/A 0.119±0.03 0.279±0.02 0.012±0.00 0.318±0.12 N/A 0.158±0.08 0.036±0.01 41.124±11.14

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