C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SUN domain containing ossification factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000094975 SUCO 9606 + 1:172532349-172611833 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263688 SUCO-001 172533217-172611831 protein_coding
  ENST00000367723 SUCO-002 172532349-172611833 protein_coding
  ENST00000486569 SUCO-003 172602149-172603205 retained_intron
  ENST00000608151 SUCO-201 172532473-172611831 protein_coding
  ENST00000608566 SUCO-005 172533383-172552152 retained_intron
  ENST00000608673 SUCO-006 172569027-172570513 retained_intron
  ENST00000608804 SUCO-007 172553330-172570796 retained_intron
  ENST00000609685 SUCO-008 172608313-172610086 retained_intron
  ENST00000610051 SUCO-004 172533183-172610279 protein_coding
  ENST00000616058 SUCO-202 172533118-172611831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263688ENST00000367723ENST00000608151ENST00000608804ENST00000610051ENST00000616058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263688 2.504±0.00 N/A 2.332±0.00 2.779±0.99 2.629±1.21 0.566±0.16 2.021±1.45 1.571±0.00 N/A 2.579±0.69 0.205±0.00 3.117±2.06 2.612±0.52 4.179±0.34
ENST00000367723 N/A N/A N/A 0.732±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608151 N/A N/A 0.657±0.00 N/A 1.428±0.26 1.541±0.00 N/A 2.089±1.53 0.829±0.00 N/A N/A 1.937±1.40 2.017±1.32 2.909±0.00
ENST00000608804 N/A N/A 3.789±0.00 5.499±0.00 N/A 3.647±0.00 N/A N/A 6.930±0.00 N/A N/A N/A N/A N/A
ENST00000610051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.384±0.00 1.293±0.00 2.172±0.00 3.204±0.00
ENST00000616058 N/A 0.654±0.00 N/A 0.648±0.00 0.564±0.00 N/A N/A 1.263±0.00 N/A N/A 0.219±0.13 0.952±0.14 N/A 5.776±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X6 CIL_0007X6_0001 VISTA 1:172021746-172625129

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0005791 ISS rough endoplasmic reticulum
GO:0007275 IEA multicellular organismal development
GO:0016020 ISS membrane
GO:0016021 IEA integral component of membrane
GO:0032967 ISS positive regulation of collagen biosynthetic process
GO:0045669 ISS positive regulation of osteoblast differentiation
GO:0046850 ISS regulation of bone remodeling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016532 suco SUN domain containing ossification factor protein_coding Danio_rerio
ENSMUSG00000040297 Suco SUN domain containing ossification factor protein_coding Mus_musculus

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