C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007X6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm712 VISTA 9606 1:172021746-172625129
GeneTranscriptPositionBiotype
ENSG00000094975 (SUCO)
SUN domain containing ossification factor 		ENST00000263688 (SUCO-001) 172533217-172611831 protein_coding
ENST00000367723 (SUCO-002) 172532349-172611833 protein_coding
ENST00000486569 (SUCO-003) 172602149-172603205 retained_intron
ENST00000608151 (SUCO-201) 172532473-172611831 protein_coding
ENST00000608566 (SUCO-005) 172533383-172552152 retained_intron
ENST00000608673 (SUCO-006) 172569027-172570513 retained_intron
ENST00000608804 (SUCO-007) 172553330-172570796 retained_intron
ENST00000609685 (SUCO-008) 172608313-172610086 retained_intron
ENST00000610051 (SUCO-004) 172533183-172610279 protein_coding
ENST00000616058 (SUCO-202) 172533118-172611831 protein_coding
ENSG00000135845 (PIGC)
phosphatidylinositol glycan anchor biosynthesis, class C 		ENST00000344529 (PIGC-001) 172441457-172444060 protein_coding
ENST00000367728 (PIGC-004) 172441457-172444086 protein_coding
ENST00000465374 (PIGC-005) 172376131-172380906 processed_transcript
ENST00000475059 (PIGC-007) 172380921-172415376 processed_transcript
ENST00000478184 (PIGC-008) 172442331-172443946 processed_transcript
ENST00000484368 (PIGC-002) 172393134-172444083 processed_transcript
ENST00000489002 (PIGC-006) 172370189-172415326 processed_transcript
ENSG00000180999 (C1orf105)
chromosome 1 open reading frame 105 		ENST00000367725 (C1orf105-003) 172452893-172468831 protein_coding
ENST00000367726 (C1orf105-002) 172451041-172468827 processed_transcript
ENST00000367727 (C1orf105-001) 172420688-172468829 protein_coding
ENST00000460397 (C1orf105-004) 172420734-172431287 protein_coding
ENST00000488100 (C1orf105-005) 172445139-172465681 protein_coding
ENSG00000197959 (DNM3)
dynamin 3 		ENST00000355305 (DNM3-003) 171841500-172408354 protein_coding
ENST00000367731 (DNM3-001) 171841500-172412717 protein_coding
ENST00000367733 (DNM3-002) 171841498-172133392 protein_coding
ENST00000485254 (DNM3-006) 172379018-172418466 protein_coding
ENST00000491124 (DNM3-005) 172387188-172389222 retained_intron
ENST00000520906 (DNM3-007) 171841529-172311284 protein_coding
ENST00000523513 (DNM3-008) 171970122-172253578 protein_coding
ENSG00000208024 (MIR199A2)
microRNA 199a-2 		ENST00000385289 (MIR199A2-201) 172144535-172144644 miRNA
ENSG00000230630 (DNM3OS)
DNM3 opposite strand/antisense RNA 		ENST00000417354 (DNM3OS-001) 172136531-172144794 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0007X6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm712 VISTA 10090 1:161774031-162377560
GeneTranscriptPositionBiotype
ENSMUSG00000000817 (Fasl)
Fas ligand (TNF superfamily, member 6) 		ENSMUST00000000834 (Fasl-201) 161780691-161788495 protein_coding
ENSMUSG00000026698 (Pigc)
phosphatidylinositol glycan anchor biosynthesis, class C 		ENSMUST00000028021 (Pigc-002) 161969188-161972330 protein_coding
ENSMUST00000111594 (Pigc-001) 161969186-161973435 protein_coding
ENSMUST00000159648 (Pigc-004) 161969302-161970531 protein_coding
ENSMUST00000160881 (Pigc-003) 161969299-161970872 protein_coding
ENSMUST00000161826 (Pigc-005) 161969200-162027106 processed_transcript
ENSMUSG00000040265 (Dnm3)
dynamin 3 		ENSMUST00000070330 (Dnm3-006) 161990212-162478034 protein_coding
ENSMUST00000086074 (Dnm3-001) 161987302-162478034 protein_coding
ENSMUST00000159763 (Dnm3-003) 161982453-162295636 protein_coding
ENSMUST00000160173 (Dnm3-007) 162282528-162313683 processed_transcript
ENSMUST00000160665 (Dnm3-004) 162006122-162295580 protein_coding
ENSMUST00000161155 (Dnm3-002) 162318171-162478012 retained_intron
ENSMUST00000161539 (Dnm3-005) 162016453-162134752 processed_transcript
ENSMUST00000161894 (Dnm3-009) 162386023-162424589 processed_transcript
ENSMUST00000162330 (Dnm3-008) 162273290-162295595 processed_transcript
ENSMUSG00000040297 (Suco)
SUN domain containing ossification factor 		ENSMUST00000048377 (Suco-201) 161816112-161876661 protein_coding
ENSMUSG00000078190 (Dnm3os)
dynamin 3, opposite strand 		ENSMUST00000139662 (Dnm3os-001) 162217623-162225550 antisense
ENSMUST00000178978 (Dnm3os-201) 162217623-162225548 antisense
ENSMUST00000185878 (Dnm3os-002) 162217664-162222111 antisense
ENSMUSG00000086277 (4930558K02Rik)
RIKEN cDNA 4930558K02 gene 		ENSMUST00000141397 (4930558K02Rik-002) 161942091-161969148 processed_transcript
ENSMUST00000162676 (4930558K02Rik-001) 161942086-161979636 protein_coding
ENSMUSG00000089933 (Gm16101)
predicted gene 16101 		ENSMUST00000160695 (Gm16101-001) 162316092-162316521 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007X6_0001ENSG00000094975ENST00000263688ENST00000367723ENST00000486569ENST00000608151ENST00000608566ENST00000608673ENST00000608804ENST00000609685ENST00000610051ENST00000616058ENSG00000135845ENST00000344529ENST00000367728ENST00000465374ENST00000475059ENST00000478184ENST00000484368ENST00000489002ENSG00000180999ENST00000367725ENST00000367726ENST00000367727ENST00000460397ENST00000488100ENSG00000197959ENST00000355305ENST00000367731ENST00000367733ENST00000485254ENST00000491124ENST00000520906ENST00000523513ENSG00000208024ENST00000385289ENSG00000230630ENST00000417354CIL_0007X6_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007X6_0001ENSG00000094975ENST00000263688ENST00000367723ENST00000608151ENST00000608804ENST00000610051ENST00000616058ENSG00000135845ENST00000344529ENST00000367728ENST00000478184ENST00000484368ENSG00000180999ENST00000367725ENST00000367726ENST00000367727ENST00000460397ENST00000488100ENSG00000197959ENST00000355305ENST00000367731ENST00000367733ENST00000485254ENST00000520906ENST00000523513ENSG00000208024ENST00000385289ENSG00000230630ENST00000417354CIL_0007X6_0002ENSMUSG00000000817ENSMUST00000000834ENSMUSG00000026698ENSMUST00000028021ENSMUST00000111594ENSMUST00000160881ENSMUSG00000040265ENSMUST00000070330ENSMUST00000086074ENSMUST00000159763ENSMUST00000160173ENSMUST00000160665ENSMUST00000161539ENSMUSG00000040297ENSMUST00000048377ENSMUSG00000078190ENSMUST00000139662ENSMUST00000178978ENSMUST00000185878ENSMUSG00000086277ENSMUST00000141397ENSMUST00000162676ENSMUSG00000089933ENSMUST00000160695
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000094975 ENST00000263688 2.504±0.00 N/A 2.332±0.00 2.779±0.99 2.629±1.21 0.566±0.16 2.021±1.45 1.571±0.00 N/A 2.579±0.69 0.205±0.00 3.117±2.06 2.612±0.52 4.179±0.34
ENST00000367723 N/A N/A N/A 0.732±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608151 N/A N/A 0.657±0.00 N/A 1.428±0.26 1.541±0.00 N/A 2.089±1.53 0.829±0.00 N/A N/A 1.937±1.40 2.017±1.32 2.909±0.00
ENST00000608566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608804 N/A N/A 3.789±0.00 5.499±0.00 N/A 3.647±0.00 N/A N/A 6.930±0.00 N/A N/A N/A N/A N/A
ENST00000609685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.384±0.00 1.293±0.00 2.172±0.00 3.204±0.00
ENST00000616058 N/A 0.654±0.00 N/A 0.648±0.00 0.564±0.00 N/A N/A 1.263±0.00 N/A N/A 0.219±0.13 0.952±0.14 N/A 5.776±0.00
ENSG00000135845 ENST00000344529 5.950±0.00 10.449±0.00 1.682±0.00 4.471±0.45 5.315±1.29 5.560±2.49 1.894±1.32 8.345±0.00 3.951±0.15 3.051±0.86 2.410±0.64 11.495±5.08 15.918±3.40 11.508±2.63
ENST00000367728 N/A N/A N/A N/A N/A 0.484±0.00 0.271±0.00 0.279±0.00 N/A N/A N/A 0.905±0.00 N/A N/A
ENST00000465374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478184 N/A N/A N/A N/A 2.227±0.00 N/A N/A 0.301±0.00 N/A N/A N/A 8.068±0.00 9.253±0.00 8.948±0.00
ENST00000484368 0.753±0.00 1.700±0.00 0.482±0.00 1.132±0.00 0.675±0.00 1.799±0.00 2.009±0.00 N/A 0.339±0.00 0.817±0.21 0.743±0.00 0.722±0.38 N/A 1.155±0.02
ENST00000489002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180999 ENST00000367725 N/A N/A N/A N/A N/A N/A 4.219±3.40 N/A N/A N/A 0.131±0.00 N/A 1.365±0.78 N/A
ENST00000367726 N/A N/A N/A N/A N/A N/A N/A 1.200±0.00 N/A N/A 0.037±0.00 0.110±0.05 N/A 4.255±0.00
ENST00000367727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.678±0.24
ENST00000460397 N/A N/A 0.722±0.00 0.027±0.00 N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A
ENST00000488100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 N/A
ENSG00000197959 ENST00000355305 N/A 0.226±0.00 N/A 6.353±0.00 N/A 0.397±0.00 0.158±0.06 N/A N/A N/A N/A N/A 0.089±0.02 0.620±0.00
ENST00000367731 N/A 0.346±0.00 N/A 12.949±6.17 0.785±0.52 0.377±0.00 N/A 0.397±0.27 0.035±0.00 0.401±0.00 0.040±0.00 0.277±0.20 0.046±0.04 0.607±0.11
ENST00000367733 0.382±0.00 0.255±0.00 N/A N/A N/A N/A N/A N/A N/A 0.727±0.00 N/A N/A N/A N/A
ENST00000485254 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.742±0.00 0.603±0.00 N/A 0.281±0.06 N/A
ENST00000491124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520906 N/A N/A N/A N/A N/A N/A 0.117±0.00 0.025±0.00 0.326±0.00 0.752±0.00 N/A N/A N/A N/A
ENST00000523513 N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A N/A N/A 0.392±0.21 N/A 0.051±0.00 0.743±0.02
ENSG00000208024 ENST00000385289 0.467±0.00 1.705±0.00 N/A N/A 0.252±0.00 N/A N/A N/A 1.497±0.00 N/A N/A N/A 7.195±0.00 0.220±0.00
ENSG00000230630 ENST00000417354 0.152±0.00 0.867±0.00 0.602±0.00 0.172±0.00 0.461±0.00 0.179±0.00 0.130±0.00 0.638±0.00 0.264±0.00 0.348±0.00 0.027±0.00 1.692±1.42 0.176±0.02 0.296±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000817 ENSMUST00000000834 0.093±0.08 0.081±0.02 0.107±0.02 0.092±0.01 0.403±0.24 0.087±0.06 0.042±0.03 0.068±0.04 0.085±0.04 0.258±0.07 0.018±0.01 0.040±0.03 0.570±0.54 0.202±0.07
ENSMUSG00000026698 ENSMUST00000028021 14.317±1.24 13.525±4.41 1.310±0.00 4.998±3.29 18.426±3.85 14.130±4.49 6.065±0.19 9.168±0.46 6.836±1.24 13.174±1.44 3.891±0.38 21.082±10.07 3.380±1.79 19.986±8.68
ENSMUST00000111594 1.594±0.38 N/A 1.242±0.00 0.874±0.03 2.204±0.30 1.691±0.35 0.769±0.15 1.154±0.29 0.860±0.12 2.040±0.34 0.512±0.00 0.704±0.00 0.440±0.15 N/A
ENSMUST00000159648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160881 N/A N/A N/A 3.996±0.00 N/A N/A N/A N/A N/A N/A 3.862±0.65 7.534±2.48 3.983±1.00 19.351±0.00
ENSMUST00000161826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040265 ENSMUST00000070330 N/A N/A N/A N/A 0.320±0.01 0.205±0.01 N/A N/A 0.025±0.00 N/A N/A N/A 0.056±0.03 N/A
ENSMUST00000086074 0.221±0.00 0.414±0.14 0.248±0.02 12.789±2.76 0.219±0.10 0.261±0.08 0.223±0.00 0.523±0.25 0.048±0.02 0.315±0.01 0.237±0.14 0.385±0.13 0.062±0.07 N/A
ENSMUST00000159763 N/A 0.561±0.08 N/A N/A 0.408±0.00 0.339±0.07 N/A N/A 0.113±0.03 N/A 0.682±0.05 1.018±0.00 0.063±0.03 N/A
ENSMUST00000160173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.455±0.00
ENSMUST00000160665 N/A N/A N/A N/A 0.685±0.00 0.234±0.00 0.411±0.00 1.476±0.26 0.234±0.11 0.843±0.00 0.704±0.00 1.093±0.21 0.319±0.00 2.884±0.27
ENSMUST00000161155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161539 N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A 0.015±0.00 N/A
ENSMUST00000161894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040297 ENSMUST00000048377 2.077±0.99 5.682±2.31 3.206±1.34 3.665±1.56 2.311±1.47 2.358±0.68 0.966±0.10 2.288±0.22 1.515±1.06 2.591±0.73 0.816±0.37 5.525±2.00 4.631±1.81 12.458±3.25
ENSMUSG00000078190 ENSMUST00000139662 0.439±0.28 0.121±0.02 0.266±0.00 0.147±0.05 0.362±0.10 0.056±0.03 0.069±0.01 0.070±0.01 0.086±0.09 0.188±0.07 0.087±0.02 0.697±0.38 0.268±0.15 0.057±0.03
ENSMUST00000178978 0.448±0.29 0.121±0.02 0.964±0.00 0.194±0.11 0.364±0.10 0.056±0.03 0.069±0.01 0.070±0.01 0.120±0.11 0.188±0.07 0.087±0.02 0.768±0.34 0.269±0.15 0.057±0.03
ENSMUST00000185878 N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086277 ENSMUST00000141397 N/A N/A 0.002±0.00 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A
ENSMUST00000162676 N/A N/A 0.025±0.00 0.034±0.01 N/A N/A N/A 0.051±0.02 0.018±0.01 N/A N/A 0.217±0.00 0.096±0.00 7.812±2.19
ENSMUSG00000089933 ENSMUST00000160695 0.178±0.05 N/A 0.029±0.00 0.219±0.00 0.146±0.00 N/A N/A 0.328±0.20 N/A 0.464±0.01 N/A 0.358±0.23 0.034±0.00 0.230±0.08

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