C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hook microtubule-tethering protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000095066 HOOK2 9606 - 19:12763003-12872740 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264827 HOOK2-001 12763004-12775620 protein_coding
  ENST00000397668 HOOK2-002 12763003-12775523 protein_coding
  ENST00000586188 HOOK2-016 12763759-12772818 nonsense_mediated_decay
  ENST00000586284 HOOK2-006 12771229-12775539 retained_intron
  ENST00000586710 HOOK2-020 12763701-12765364 retained_intron
  ENST00000586719 HOOK2-011 12771277-12778419 nonsense_mediated_decay
  ENST00000587178 HOOK2-005 12772190-12775570 protein_coding
  ENST00000587964 HOOK2-017 12771817-12772680 protein_coding
  ENST00000588052 HOOK2-015 12771395-12773253 protein_coding
  ENST00000589134 HOOK2-022 12774078-12775544 retained_intron
  ENST00000589398 HOOK2-018 12765793-12768084 retained_intron
  ENST00000589400 HOOK2-012 12769956-12778412 protein_coding
  ENST00000589765 HOOK2-024 12774159-12872740 processed_transcript
  ENST00000589915 HOOK2-021 12763363-12763722 retained_intron
  ENST00000589965 HOOK2-007 12765167-12775533 processed_transcript
  ENST00000590839 HOOK2-010 12771229-12778420 protein_coding
  ENST00000591251 HOOK2-014 12773973-12778392 retained_intron
  ENST00000591641 HOOK2-009 12774336-12778446 retained_intron
  ENST00000591839 HOOK2-019 12765657-12766614 retained_intron
  ENST00000592079 HOOK2-008 12770937-12778457 protein_coding
  ENST00000592259 HOOK2-003 12764348-12766523 retained_intron
  ENST00000592512 HOOK2-013 12774535-12778409 retained_intron
  ENST00000592808 HOOK2-004 12773952-12775572 retained_intron
  ENST00000593143 HOOK2-023 12774502-12792582 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyOvaryTestisENST00000264827ENST00000397668
Transcript ID Breast Heart Kidney Ovary Testis
ENST00000264827 35.064±0.00 5.561±4.82 10.682±0.00 24.903±0.00 8.125±1.01
ENST00000397668 N/A N/A 1.457±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_00016T CIL_00016T_0002 CGP 19:12763003-12872740

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005874 IEA microtubule
GO:0006897 TAS endocytosis
GO:0007032 IMP endosome organization
GO:0007040 IMP lysosome organization
GO:0008333 IMP endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0030897 IDA HOPS complex
GO:0042802 IPI identical protein binding
GO:0045022 IMP early endosome to late endosome transport
GO:0070695 IDA FHF complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039309 hook2 hook homolog 2 (Drosophila) protein_coding Danio_rerio
ENSDARG00000087372 HOOK1 hook microtubule-tethering protein 2 protein_coding Danio_rerio
ENSMUSG00000052566 Hook2 hook homolog 2 (Drosophila) protein_coding Mus_musculus

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