Source ID |
Type |
Tax ID |
Position |
hs1900 |
VISTA |
9606 |
19:12752697-13356541 |
Gene | Transcript | Position | Biotype |
ENSG00000008441 (NFIX)
nuclear factor I/X (CCAAT-binding transcription factor)
|
ENST00000358552 (NFIX-201)
|
13024580-13098766 |
protein_coding |
ENST00000360105 (NFIX-003)
|
13024580-13098796 |
protein_coding |
ENST00000397661 (NFIX-001)
|
12995608-13096201 |
protein_coding |
ENST00000585382 (NFIX-009)
|
13012207-13081835 |
nonsense_mediated_decay |
ENST00000585575 (NFIX-006)
|
13024032-13094649 |
protein_coding |
ENST00000586797 (NFIX-005)
|
13024585-13094684 |
nonsense_mediated_decay |
ENST00000586873 (NFIX-011)
|
13024627-13025510 |
protein_coding |
ENST00000587260 (NFIX-007)
|
13024939-13094770 |
protein_coding |
ENST00000587760 (NFIX-002)
|
13023991-13094758 |
protein_coding |
ENST00000588228 (NFIX-004)
|
13024581-13094755 |
protein_coding |
ENST00000588680 (NFIX-012)
|
13070003-13074019 |
processed_transcript |
ENST00000590027 (NFIX-008)
|
13012188-13025520 |
protein_coding |
ENST00000591028 (NFIX-010)
|
13024613-13025495 |
protein_coding |
ENST00000592199 (NFIX-013)
|
12995838-13094649 |
protein_coding |
ENSG00000039987 (BEST2)
bestrophin 2
|
ENST00000042931 (BEST2-201)
|
12752593-12758455 |
protein_coding |
ENST00000549706 (BEST2-002)
|
12751702-12758406 |
protein_coding |
ENST00000552539 (BEST2-003)
|
12755859-12756706 |
protein_coding |
ENST00000553030 (BEST2-001)
|
12751802-12758458 |
protein_coding |
ENSG00000095066 (HOOK2)
hook microtubule-tethering protein 2
|
ENST00000264827 (HOOK2-001)
|
12763004-12775620 |
protein_coding |
ENST00000397668 (HOOK2-002)
|
12763003-12775523 |
protein_coding |
ENST00000586188 (HOOK2-016)
|
12763759-12772818 |
nonsense_mediated_decay |
ENST00000586284 (HOOK2-006)
|
12771229-12775539 |
retained_intron |
ENST00000586710 (HOOK2-020)
|
12763701-12765364 |
retained_intron |
ENST00000586719 (HOOK2-011)
|
12771277-12778419 |
nonsense_mediated_decay |
ENST00000587178 (HOOK2-005)
|
12772190-12775570 |
protein_coding |
ENST00000587964 (HOOK2-017)
|
12771817-12772680 |
protein_coding |
ENST00000588052 (HOOK2-015)
|
12771395-12773253 |
protein_coding |
ENST00000589134 (HOOK2-022)
|
12774078-12775544 |
retained_intron |
ENST00000589398 (HOOK2-018)
|
12765793-12768084 |
retained_intron |
ENST00000589400 (HOOK2-012)
|
12769956-12778412 |
protein_coding |
ENST00000589765 (HOOK2-024)
|
12774159-12872740 |
processed_transcript |
ENST00000589915 (HOOK2-021)
|
12763363-12763722 |
retained_intron |
ENST00000589965 (HOOK2-007)
|
12765167-12775533 |
processed_transcript |
ENST00000590839 (HOOK2-010)
|
12771229-12778420 |
protein_coding |
ENST00000591251 (HOOK2-014)
|
12773973-12778392 |
retained_intron |
ENST00000591641 (HOOK2-009)
|
12774336-12778446 |
retained_intron |
ENST00000591839 (HOOK2-019)
|
12765657-12766614 |
retained_intron |
ENST00000592079 (HOOK2-008)
|
12770937-12778457 |
protein_coding |
ENST00000592259 (HOOK2-003)
|
12764348-12766523 |
retained_intron |
ENST00000592512 (HOOK2-013)
|
12774535-12778409 |
retained_intron |
ENST00000592808 (HOOK2-004)
|
12773952-12775572 |
retained_intron |
ENST00000593143 (HOOK2-023)
|
12774502-12792582 |
retained_intron |
ENSG00000104889 (RNASEH2A)
ribonuclease H2, subunit A
|
ENST00000221486 (RNASEH2A-001)
|
12806580-12813637 |
protein_coding |
ENST00000590121 (RNASEH2A-003)
|
12806677-12807957 |
retained_intron |
ENST00000590279 (RNASEH2A-004)
|
12806684-12807505 |
retained_intron |
ENST00000593017 (RNASEH2A-002)
|
12806592-12813638 |
retained_intron |
ENSG00000104903 (LYL1)
lymphoblastic leukemia associated hematopoiesis regulator 1
|
ENST00000264824 (LYL1-001)
|
13099033-13102867 |
protein_coding |
ENST00000590120 (LYL1-002)
|
13101178-13102724 |
retained_intron |
ENST00000590974 (LYL1-003)
|
13100690-13103161 |
protein_coding |
ENSG00000104907 (TRMT1)
tRNA methyltransferase 1 homolog (S. cerevisiae)
|
ENST00000221504 (TRMT1-002)
|
13104907-13116657 |
protein_coding |
ENST00000357720 (TRMT1-201)
|
13104902-13116749 |
protein_coding |
ENST00000437766 (TRMT1-202)
|
13104902-13116649 |
protein_coding |
ENST00000585435 (TRMT1-016)
|
13107602-13109642 |
retained_intron |
ENST00000585622 (TRMT1-018)
|
13115702-13116721 |
retained_intron |
ENST00000586224 (TRMT1-008)
|
13115464-13116748 |
nonsense_mediated_decay |
ENST00000586830 (TRMT1-017)
|
13107775-13109732 |
retained_intron |
ENST00000587487 (TRMT1-012)
|
13109645-13116702 |
protein_coding |
ENST00000587633 (TRMT1-015)
|
13110186-13116027 |
nonsense_mediated_decay |
ENST00000588229 (TRMT1-020)
|
13115871-13116736 |
protein_coding |
ENST00000588511 (TRMT1-004)
|
13104939-13116725 |
retained_intron |
ENST00000588746 (TRMT1-011)
|
13115458-13116736 |
nonsense_mediated_decay |
ENST00000588813 (TRMT1-021)
|
13115379-13116733 |
processed_transcript |
ENST00000590812 (TRMT1-005)
|
13115836-13116759 |
retained_intron |
ENST00000591425 (TRMT1-010)
|
13115423-13116736 |
processed_transcript |
ENST00000591717 (TRMT1-007)
|
13113001-13116749 |
nonsense_mediated_decay |
ENST00000592062 (TRMT1-001)
|
13104907-13117567 |
protein_coding |
ENST00000592606 (TRMT1-006)
|
13115947-13116759 |
retained_intron |
ENST00000592729 (TRMT1-013)
|
13115441-13116622 |
processed_transcript |
ENST00000592814 (TRMT1-019)
|
13110158-13116712 |
protein_coding |
ENST00000592892 (TRMT1-009)
|
13115627-13116748 |
processed_transcript |
ENST00000593157 (TRMT1-003)
|
13104907-13116740 |
retained_intron |
ENST00000593257 (TRMT1-014)
|
13112955-13116159 |
processed_transcript |
ENSG00000104915 (STX10)
syntaxin 10
|
ENST00000242770 (STX10-004)
|
13144062-13150178 |
protein_coding |
ENST00000343587 (STX10-003)
|
13144058-13150346 |
protein_coding |
ENST00000440593 (STX10-010)
|
13144489-13150341 |
nonsense_mediated_decay |
ENST00000587230 (STX10-002)
|
13144089-13150238 |
protein_coding |
ENST00000587318 (STX10-008)
|
13144062-13149885 |
protein_coding |
ENST00000588848 (STX10-011)
|
13144601-13150313 |
protein_coding |
ENST00000589083 (STX10-005)
|
13144062-13150226 |
protein_coding |
ENST00000591197 (STX10-006)
|
13145303-13150383 |
protein_coding |
ENST00000591415 (STX10-009)
|
13144615-13145414 |
protein_coding |
ENST00000591843 (STX10-001)
|
13144058-13150287 |
nonsense_mediated_decay |
ENST00000593126 (STX10-007)
|
13144271-13149839 |
protein_coding |
ENSG00000105607 (GCDH)
glutaryl-CoA dehydrogenase
|
ENST00000222214 (GCDH-001)
|
12891026-12899969 |
protein_coding |
ENST00000421816 (GCDH-003)
|
12891160-12897477 |
retained_intron |
ENST00000585420 (GCDH-005)
|
12891180-12899624 |
retained_intron |
ENST00000585760 (GCDH-011)
|
12891269-12892283 |
retained_intron |
ENST00000587072 (GCDH-015)
|
12891177-12893493 |
protein_coding |
ENST00000587832 (GCDH-014)
|
12891180-12893882 |
retained_intron |
ENST00000588242 (GCDH-013)
|
12899571-12900670 |
processed_transcript |
ENST00000588905 (GCDH-010)
|
12891168-12896015 |
protein_coding |
ENST00000589039 (GCDH-008)
|
12891160-12895995 |
protein_coding |
ENST00000590445 (GCDH-009)
|
12891164-12892129 |
nonsense_mediated_decay |
ENST00000590472 (GCDH-012)
|
12897303-12898383 |
protein_coding |
ENST00000590530 (GCDH-004)
|
12891166-12899969 |
nonsense_mediated_decay |
ENST00000590627 (GCDH-006)
|
12891180-12893834 |
retained_intron |
ENST00000591043 (GCDH-007)
|
12891269-12899678 |
retained_intron |
ENST00000591050 (GCDH-016)
|
12897380-12914207 |
protein_coding |
ENST00000591470 (GCDH-002)
|
12891160-12899946 |
protein_coding |
ENSG00000105610 (KLF1)
Kruppel-like factor 1 (erythroid)
|
ENST00000264834 (KLF1-001)
|
12884423-12887181 |
protein_coding |
ENSG00000105612 (DNASE2)
deoxyribonuclease II, lysosomal
|
ENST00000222219 (DNASE2-001)
|
12875211-12881468 |
protein_coding |
ENST00000586547 (DNASE2-003)
|
12878038-12878834 |
retained_intron |
ENST00000588777 (DNASE2-004)
|
12875936-12878680 |
retained_intron |
ENST00000592506 (DNASE2-002)
|
12876254-12881466 |
protein_coding |
ENSG00000105613 (MAST1)
microtubule associated serine/threonine kinase 1
|
ENST00000251472 (MAST1-001)
|
12838534-12874951 |
protein_coding |
ENST00000585791 (MAST1-010)
|
12873254-12874349 |
retained_intron |
ENST00000588379 (MAST1-003)
|
12840503-12858921 |
protein_coding |
ENST00000589040 (MAST1-008)
|
12852186-12865468 |
retained_intron |
ENST00000590204 (MAST1-007)
|
12847819-12852171 |
protein_coding |
ENST00000590553 (MAST1-009)
|
12868601-12873640 |
retained_intron |
ENST00000590883 (MAST1-002)
|
12838473-12848979 |
retained_intron |
ENST00000591495 (MAST1-005)
|
12833951-12858864 |
protein_coding |
ENST00000592713 (MAST1-006)
|
12847235-12847801 |
retained_intron |
ENSG00000141837 (CACNA1A)
calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
|
ENST00000360228 (CACNA1A-001)
|
13206442-13506224 |
protein_coding |
ENST00000573710 (CACNA1A-002)
|
13207301-13506503 |
protein_coding |
ENST00000573891 (CACNA1A-004)
|
13231710-13255098 |
nonsense_mediated_decay |
ENST00000574822 (CACNA1A-003)
|
13229080-13253080 |
processed_transcript |
ENST00000574974 (CACNA1A-006)
|
13371761-13623990 |
protein_coding |
ENST00000585802 (CACNA1A-012)
|
13207301-13275896 |
protein_coding |
ENST00000586190 (CACNA1A-011)
|
13214440-13224956 |
retained_intron |
ENST00000587451 (CACNA1A-008)
|
13518975-13520257 |
processed_transcript |
ENST00000587525 (CACNA1A-013)
|
13206494-13257400 |
protein_coding |
ENST00000590205 (CACNA1A-009)
|
13261464-13262901 |
retained_intron |
ENST00000592864 (CACNA1A-007)
|
13518975-13599967 |
protein_coding |
ENST00000593160 (CACNA1A-014)
|
13334055-13365320 |
retained_intron |
ENST00000593267 (CACNA1A-010)
|
13234823-13235885 |
retained_intron |
ENST00000614285 (CACNA1A-201)
|
13206442-13506224 |
protein_coding |
ENSG00000160877 (NACC1)
nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
|
ENST00000292431 (NACC1-001)
|
13118337-13141141 |
protein_coding |
ENST00000585663 (NACC1-002)
|
13137279-13138736 |
protein_coding |
ENST00000586171 (NACC1-003)
|
13118103-13135704 |
protein_coding |
ENSG00000160888 (IER2)
immediate early response 2
|
ENST00000292433 (IER2-001)
|
13150433-13154908 |
protein_coding |
ENST00000587885 (IER2-003)
|
13150415-13154249 |
protein_coding |
ENST00000588173 (IER2-002)
|
13151975-13154908 |
protein_coding |
ENSG00000161860 (SYCE2)
synaptonemal complex central element protein 2
|
ENST00000293695 (SYCE2-001)
|
12898786-12919276 |
protein_coding |
ENST00000591229 (SYCE2-003)
|
12904517-12906203 |
processed_transcript |
ENST00000592819 (SYCE2-004)
|
12899082-12900484 |
protein_coding |
ENSG00000167815 (PRDX2)
peroxiredoxin 2
|
ENST00000301522 (PRDX2-001)
|
12796820-12801859 |
protein_coding |
ENST00000334482 (PRDX2-002)
|
12796820-12801787 |
protein_coding |
ENST00000466174 (PRDX2-006)
|
12796823-12801789 |
retained_intron |
ENST00000477555 (PRDX2-003)
|
12799916-12801788 |
retained_intron |
ENST00000478908 (PRDX2-004)
|
12799862-12800461 |
retained_intron |
ENST00000498785 (PRDX2-005)
|
12799556-12800247 |
retained_intron |
ENSG00000171223 (JUNB)
jun B proto-oncogene
|
ENST00000302754 (JUNB-001)
|
12791496-12793315 |
protein_coding |
ENSG00000179115 (FARSA)
phenylalanyl-tRNA synthetase, alpha subunit
|
ENST00000314606 (FARSA-001)
|
12922480-12933715 |
protein_coding |
ENST00000423140 (FARSA-002)
|
12922480-12933714 |
protein_coding |
ENST00000586146 (FARSA-004)
|
12922530-12933696 |
nonsense_mediated_decay |
ENST00000586280 (FARSA-009)
|
12928410-12933642 |
retained_intron |
ENST00000587488 (FARSA-010)
|
12922545-12928439 |
protein_coding |
ENST00000587981 (FARSA-007)
|
12930307-12933711 |
protein_coding |
ENST00000588025 (FARSA-006)
|
12922479-12934037 |
protein_coding |
ENST00000588965 (FARSA-003)
|
12922540-12933696 |
retained_intron |
ENST00000592662 (FARSA-008)
|
12928398-12933698 |
retained_intron |
ENST00000593021 (FARSA-005)
|
12924151-12933680 |
protein_coding |
ENSG00000179218 (CALR)
calreticulin
|
ENST00000316448 (CALR-001)
|
12938607-12944489 |
protein_coding |
ENST00000586760 (CALR-006)
|
12940397-12944403 |
protein_coding |
ENST00000586803 (CALR-005)
|
12943213-12943962 |
retained_intron |
ENST00000586967 (CALR-007)
|
12943873-12944489 |
nonsense_mediated_decay |
ENST00000587486 (CALR-003)
|
12938578-12940147 |
retained_intron |
ENST00000588454 (CALR-008)
|
12938645-12940872 |
protein_coding |
ENST00000590325 (CALR-004)
|
12938614-12940370 |
retained_intron |
ENSG00000179262 (RAD23A)
RAD23 homolog A (S. cerevisiae)
|
ENST00000316856 (RAD23A-001)
|
12945876-12953623 |
protein_coding |
ENST00000586375 (RAD23A-010)
|
12948689-12953405 |
nonsense_mediated_decay |
ENST00000586534 (RAD23A-002)
|
12945888-12953642 |
protein_coding |
ENST00000588329 (RAD23A-006)
|
12945866-12949282 |
retained_intron |
ENST00000588826 (RAD23A-007)
|
12946005-12949576 |
processed_transcript |
ENST00000590881 (RAD23A-008)
|
12949084-12953595 |
protein_coding |
ENST00000591467 (RAD23A-009)
|
12952364-12952990 |
retained_intron |
ENST00000591499 (RAD23A-003)
|
12945855-12953269 |
nonsense_mediated_decay |
ENST00000592268 (RAD23A-005)
|
12945892-12953591 |
protein_coding |
ENST00000593114 (RAD23A-004)
|
12945894-12953613 |
nonsense_mediated_decay |
ENSG00000179271 (GADD45GIP1)
growth arrest and DNA-damage-inducible, gamma interacting protein 1
|
ENST00000316939 (GADD45GIP1-001)
|
12953119-12957236 |
protein_coding |
ENSG00000179284 (DAND5)
DAN domain family member 5, BMP antagonist
|
ENST00000317060 (DAND5-001)
|
12969482-12974762 |
protein_coding |
ENST00000585548 (DAND5-002)
|
12965159-12974524 |
protein_coding |
ENSG00000213253 (CTC-250I14.1)
|
ENST00000481802 (CTC-250I14.1-001)
|
13157959-13158788 |
processed_pseudogene |
ENSG00000240616 (AD000092.3)
|
ENST00000464444 (AD000092.3-001)
|
12894133-12894880 |
processed_pseudogene |
ENSG00000266721 (MIR5695)
microRNA 5695
|
ENST00000579717 (MIR5695-201)
|
12920320-12920404 |
miRNA |
ENSG00000266897 (AC005546.2)
|
ENST00000591837 (AC005546.2-002)
|
13131571-13132410 |
lincRNA |
ENSG00000267062 (CTD-2659N19.10)
|
ENST00000585496 (CTD-2659N19.10-001)
|
12796823-12801849 |
antisense |
ENSG00000267212 (CTD-2659N19.9)
|
ENST00000590065 (CTD-2659N19.9-001)
|
12784539-12785101 |
lincRNA |
ENSG00000267417 (CTC-239J10.1)
|
ENST00000586630 (CTC-239J10.1-001)
|
13013662-13014511 |
antisense |
ENSG00000267458 (CTC-425F1.4)
|
ENST00000589120 (CTC-425F1.4-001)
|
12944118-12944487 |
antisense |
ENSG00000267512 (CTC-250I14.3)
|
ENST00000591825 (CTC-250I14.3-001)
|
13139617-13141147 |
antisense |
ENSG00000267598 (CTC-250I14.6)
|
ENST00000586483 (CTC-250I14.6-001)
|
13153071-13153712 |
antisense |
ENST00000592882 (CTC-250I14.6-002)
|
13153096-13154193 |
antisense |
ENSG00000267735 (CTD-2265O21.7)
|
ENST00000592400 (CTD-2265O21.7-001)
|
12880969-12884088 |
antisense |
ENSG00000279044 (AC007787.3)
|
ENST00000625100 (AC007787.3-001)
|
13081966-13082564 |
TEC |