C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cartilage acidic protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000095713 CRTAC1 9606 - 10:97865000-98030828 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309155 CRTAC1-003 97879651-98011337 protein_coding
  ENST00000370591 CRTAC1-201 97879629-98030828 protein_coding
  ENST00000370597 CRTAC1-001 97865000-98030828 protein_coding
  ENST00000413387 CRTAC1-002 97865000-97936278 protein_coding
  ENST00000436034 CRTAC1-004 97878397-97884242 protein_coding
  ENST00000468549 CRTAC1-005 97880346-97884548 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryTestisENST00000309155ENST00000370591ENST00000370597ENST00000413387ENST00000468549
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Testis
ENST00000309155 N/A N/A N/A 4.570±2.64 0.026±0.00 N/A 0.791±0.00 N/A N/A 2.386±0.00 0.945±0.38
ENST00000370591 N/A N/A N/A 7.829±0.00 N/A 0.177±0.00 N/A N/A N/A N/A N/A
ENST00000370597 2.077±0.00 1.600±0.00 N/A N/A 11.489±0.00 0.109±0.01 1.709±0.00 0.050±0.00 5.645±4.59 3.373±3.22 0.971±0.26
ENST00000413387 1.264±0.00 1.356±0.00 0.143±0.00 N/A 3.358±0.00 0.214±0.00 0.536±0.19 1.118±0.00 2.376±0.00 0.263±0.00 1.611±0.00
ENST00000468549 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.753±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004V9 CIL_0004V9_0001 CGP 10:97766751-97871580
CIL_0001BZ CIL_0001BZ_0003 CGP 10:97850239-98030828
CIL_0001BX CIL_0001BX_0002 CGP 10:97865000-98244897

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007413 IEA axonal fasciculation
GO:0021772 IEA olfactory bulb development
GO:0030426 IEA growth cone
GO:0070062 IDA extracellular vesicular exosome
GO:1900121 IEA negative regulation of receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059826 crtac1a cartilage acidic protein 1a protein_coding Danio_rerio
ENSDARG00000075394 crtac1b cartilage acidic protein 1b protein_coding Danio_rerio
ENSMUSG00000042401 Crtac1 cartilage acidic protein 1 protein_coding Mus_musculus

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