C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059826-ENSDARG00000089243 CGP 7955 1:55473932-55498014
GeneTranscriptPositionBiotype
ENSDARG00000059826 (crtac1a)
cartilage acidic protein 1a 		ENSDART00000129710 (crtac1a-001) 55473933-55487002 protein_coding
ENSDART00000133140 (crtac1a-002) 55473932-55479036 retained_intron
ENSDART00000147212 (crtac1a-003) 55474022-55477547 protein_coding
ENSDARG00000089243 (r3hcc1l)
R3H domain and coiled-coil containing 1-like 		ENSDART00000122551 (r3hcc1l-201) 55489774-55498014 protein_coding
ENSDART00000152528 (r3hcc1l-001) 55487469-55497873 protein_coding
CIL_0001BX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095713-ENSG00000166024 CGP 9606 10:97865000-98244897
GeneTranscriptPositionBiotype
ENSG00000095713 (CRTAC1)
cartilage acidic protein 1 		ENST00000309155 (CRTAC1-003) 97879651-98011337 protein_coding
ENST00000370591 (CRTAC1-201) 97879629-98030828 protein_coding
ENST00000370597 (CRTAC1-001) 97865000-98030828 protein_coding
ENST00000413387 (CRTAC1-002) 97865000-97936278 protein_coding
ENST00000436034 (CRTAC1-004) 97878397-97884242 protein_coding
ENST00000468549 (CRTAC1-005) 97880346-97884548 processed_transcript
ENSG00000155265 (GOLGA7B)
golgin A7 family, member B 		ENST00000370602 (GOLGA7B-001) 97850239-97871578 protein_coding
ENST00000423054 (GOLGA7B-002) 97866231-97871580 processed_transcript
ENST00000596005 (GOLGA7B-201) 97859449-97871577 protein_coding
ENSG00000166024 (R3HCC1L)
R3H domain and coiled-coil containing 1-like 		ENST00000298999 (R3HCC1L-001) 98134671-98244897 protein_coding
ENST00000314594 (R3HCC1L-201) 98163287-98244894 protein_coding
ENST00000370584 (R3HCC1L-202) 98134624-98244894 protein_coding
ENST00000370586 (R3HCC1L-002) 98162883-98244349 protein_coding
ENST00000612478 (R3HCC1L-203) 98163287-98244894 protein_coding
ENST00000613938 (R3HCC1L-204) 98163287-98244892 protein_coding
CIL_0001BX_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042401-ENSMUSG00000025184 CGP 10090 19:42283037-42592343
GeneTranscriptPositionBiotype
ENSMUSG00000025184 (R3hcc1l)
R3H domain and coiled-coil containing 1 like 		ENSMUST00000026188 (R3hcc1l-001) 42518759-42592343 protein_coding
ENSMUST00000160107 (R3hcc1l-003) 42518798-42591010 protein_coding
ENSMUST00000160893 (R3hcc1l-004) 42518822-42576100 protein_coding
ENSMUST00000161422 (R3hcc1l-005) 42564241-42576665 retained_intron
ENSMUST00000162238 (R3hcc1l-002) 42581161-42584771 retained_intron
ENSMUSG00000042401 (Crtac1)
cartilage acidic protein 1 		ENSMUST00000048630 (Crtac1-201) 42283037-42431783 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BX_0001ENSDARG00000059826ENSDART00000129710ENSDART00000133140ENSDART00000147212ENSDARG00000089243ENSDART00000122551ENSDART00000152528CIL_0001BX_0002ENSG00000095713ENST00000309155ENST00000370591ENST00000370597ENST00000413387ENST00000436034ENST00000468549ENSG00000155265ENST00000370602ENST00000423054ENST00000596005ENSG00000166024ENST00000298999ENST00000314594ENST00000370584ENST00000370586ENST00000612478ENST00000613938CIL_0001BX_0003ENSMUSG00000025184ENSMUST00000026188ENSMUST00000160107ENSMUST00000160893ENSMUST00000161422ENSMUST00000162238ENSMUSG00000042401ENSMUST00000048630
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BX_0001ENSDARG00000059826ENSDART00000129710ENSDART00000133140ENSDART00000147212ENSDARG00000089243ENSDART00000122551ENSDART00000152528CIL_0001BX_0002ENSG00000095713ENST00000309155ENST00000370591ENST00000370597ENST00000413387ENST00000468549ENSG00000155265ENST00000370602ENST00000596005ENSG00000166024ENST00000298999ENST00000314594ENST00000370584ENST00000612478ENST00000613938CIL_0001BX_0003ENSMUSG00000025184ENSMUST00000026188ENSMUST00000160107ENSMUST00000162238ENSMUSG00000042401ENSMUST00000048630
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059826 ENSDART00000129710 N/A N/A N/A 29.545±20.63 N/A N/A 3.403±0.05 1.073±0.00 N/A N/A 3.813±0.00 N/A N/A N/A
ENSDART00000133140 N/A N/A N/A N/A N/A N/A 2.904±0.28 3.229±0.00 0.117±0.00 N/A N/A N/A N/A N/A
ENSDART00000147212 N/A N/A N/A 4.223±0.00 N/A N/A 2.724±0.00 4.678±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000089243 ENSDART00000122551 N/A N/A N/A 8.972±2.68 N/A N/A 43.328±32.42 4.679±0.00 1.548±0.00 N/A 5.871±0.00 N/A N/A N/A
ENSDART00000152528 N/A N/A N/A 4.023±1.47 N/A N/A 4.037±0.00 7.113±0.00 N/A N/A 4.076±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095713 ENST00000309155 N/A N/A N/A 4.570±2.64 N/A 0.026±0.00 N/A 0.791±0.00 N/A N/A N/A 2.386±0.00 N/A 0.945±0.38
ENST00000370591 N/A N/A N/A 7.829±0.00 N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000370597 2.077±0.00 1.600±0.00 N/A N/A N/A 11.489±0.00 0.109±0.01 1.709±0.00 0.050±0.00 5.645±4.59 N/A 3.373±3.22 N/A 0.971±0.26
ENST00000413387 1.264±0.00 1.356±0.00 0.143±0.00 N/A N/A 3.358±0.00 0.214±0.00 0.536±0.19 1.118±0.00 2.376±0.00 N/A 0.263±0.00 N/A 1.611±0.00
ENST00000436034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.753±0.00 N/A N/A
ENSG00000155265 ENST00000370602 N/A N/A N/A 5.056±0.00 0.578±0.00 0.002±0.00 N/A N/A N/A N/A 0.444±0.00 0.004±0.00 0.126±0.12 1.001±0.00
ENST00000423054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596005 0.301±0.00 0.144±0.00 N/A 1.411±0.00 0.243±0.00 0.005±0.00 0.102±0.00 N/A 0.045±0.00 N/A N/A 0.147±0.11 0.052±0.04 0.071±0.00
ENSG00000166024 ENST00000298999 0.976±0.00 1.209±0.00 N/A 0.715±0.12 N/A 1.188±0.38 0.538±0.00 N/A 0.852±0.63 0.438±0.00 0.277±0.00 1.387±0.46 0.457±0.12 3.012±0.00
ENST00000314594 1.252±0.00 N/A N/A 1.000±0.00 0.775±0.19 1.506±0.64 0.549±0.00 2.073±0.00 0.530±0.00 2.583±0.83 0.684±0.00 1.050±0.55 0.706±0.14 5.565±2.38
ENST00000370584 N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 0.742±0.00 N/A 0.701±0.00 0.565±0.15 1.558±0.00
ENST00000370586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612478 N/A 0.814±0.00 N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613938 0.876±0.00 3.946±0.00 N/A N/A 1.116±0.00 0.936±0.00 N/A 3.648±0.00 1.402±0.00 N/A 0.812±0.00 2.002±1.19 1.131±0.01 5.618±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025184 ENSMUST00000026188 2.573±0.21 0.750±0.31 4.417±0.06 2.162±0.93 2.470±0.26 1.258±0.40 1.410±0.19 1.977±0.35 2.593±1.27 3.081±0.65 1.816±0.20 2.994±0.81 3.519±1.20 2.673±0.46
ENSMUST00000160107 N/A N/A 5.509±0.00 4.310±0.80 N/A N/A N/A 2.022±0.00 4.430±0.73 N/A 1.481±0.28 12.372±4.12 5.199±1.92 13.410±0.00
ENSMUST00000160893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162238 N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A 0.401±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000042401 ENSMUST00000048630 2.304±1.63 0.401±0.21 0.117±0.02 9.888±5.09 0.165±0.06 1.002±0.16 0.027±0.01 0.054±0.02 0.029±0.02 0.053±0.03 0.044±0.02 1.780±0.84 0.126±0.09 0.456±0.10

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