C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: palmdelphin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000099260 PALMD 9606 + 1:99645943-99694541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263174 PALMD-001 99645943-99694541 protein_coding
  ENST00000496843 PALMD-002 99683266-99694541 retained_intron
  ENST00000605497 PALMD-003 99646193-99690077 protein_coding
  ENST00000605613 PALMD-004 99667580-99669823 retained_intron
  ENST00000615664 PALMD-201 99646342-99694368 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263174ENST00000496843ENST00000605497ENST00000605613ENST00000615664
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263174 15.867±0.00 3.274±0.00 0.177±0.00 1.823±0.00 16.620±11.72 1.956±1.72 13.803±1.03 2.837±1.00 3.233±0.94 3.255±0.13 8.443±1.36 4.640±4.17 7.252±3.83 2.749±0.00
ENST00000496843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.912±0.00 N/A N/A 0.430±0.00
ENST00000605497 N/A N/A 0.155±0.00 N/A 1.787±0.00 1.054±0.00 7.862±0.00 1.187±0.17 N/A 1.355±0.00 5.258±0.00 3.621±0.00 5.464±3.23 2.928±0.38
ENST00000605613 N/A N/A 0.695±0.00 N/A N/A N/A N/A N/A N/A 1.952±0.00 N/A N/A N/A N/A
ENST00000615664 38.216±0.00 9.395±0.00 0.162±0.00 2.148±0.00 83.110±0.00 8.679±0.00 21.251±0.00 2.553±0.00 2.261±0.00 4.956±0.00 19.943±0.00 7.787±1.30 6.743±0.15 10.965±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C7 CIL_0007C7_0002 CGP 1:99263953-99694541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane
GO:0030425 IEA dendrite
GO:0043197 IEA dendritic spine

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001913 palmda palmdelphin a protein_coding Danio_rerio
ENSDARG00000034321 palmdb palmdelphin b protein_coding Danio_rerio
ENSMUSG00000033377 Palmd palmdelphin protein_coding Mus_musculus

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