C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: palmdelphin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263174 PALMD-001 ENSG00000099260 9606 + 1:99645943-99694541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263174 15.867±0.00 3.274±0.00 0.177±0.00 1.823±0.00 16.620±11.72 1.956±1.72 13.803±1.03 2.837±1.00 3.233±0.94 3.255±0.13 8.443±1.36 4.640±4.17 7.252±3.83 2.749±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007C7 CIL_0007C7_0002 CGP 1:99263953-99694541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane
GO:0030425 IEA dendrite
GO:0043197 IEA dendritic spine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040097 Palmd-001 protein_coding Mus_musculus 0 2095
ENSMUST00000119557 Palmd-002 protein_coding Mus_musculus 0 1810
ENSMUST00000143611 Palmd-003 protein_coding Mus_musculus 0 442
ENSMUST00000117592 4930455H04Rik-001 protein_coding Mus_musculus 2e-38 165

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