C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: catsper channel auxiliary subunit gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000099338 CATSPERG 9606 + 19:38335775-38370943 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312265 CATSPERG-005 38335818-38370943 nonsense_mediated_decay
  ENST00000409235 CATSPERG-004 38335775-38370943 protein_coding
  ENST00000409410 CATSPERG-003 38335996-38361749 protein_coding
  ENST00000410018 CATSPERG-001 38335775-38370943 protein_coding
  ENST00000412458 CATSPERG-007 38343667-38370615 nonsense_mediated_decay
  ENST00000466060 CATSPERG-015 38343628-38358560 processed_transcript
  ENST00000467739 CATSPERG-013 38346484-38349629 processed_transcript
  ENST00000470292 CATSPERG-012 38358070-38359647 retained_intron
  ENST00000471517 CATSPERG-002 38335833-38370942 nonsense_mediated_decay
  ENST00000475343 CATSPERG-014 38335849-38346603 nonsense_mediated_decay
  ENST00000475646 CATSPERG-010 38343749-38344376 retained_intron
  ENST00000477793 CATSPERG-009 38337028-38337861 retained_intron
  ENST00000488473 CATSPERG-011 38343827-38346629 retained_intron
  ENST00000489693 CATSPERG-016 38352415-38360580 protein_coding
  ENST00000492088 CATSPERG-006 38364891-38370941 retained_intron
  ENST00000585424 CATSPERG-018 38358512-38359857 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312265ENST00000409235ENST00000409410ENST00000410018ENST00000412458ENST00000466060ENST00000467739ENST00000471517ENST00000475343ENST00000475646ENST00000477793ENST00000488473ENST00000489693ENST00000492088
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312265 N/A N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A
ENST00000409235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.553±5.71
ENST00000409410 0.082±0.00 N/A N/A 0.629±0.00 0.162±0.00 0.042±0.00 N/A 0.188±0.00 N/A 0.081±0.00 0.053±0.00 0.253±0.16 N/A 4.599±0.00
ENST00000410018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.655±0.00
ENST00000412458 0.093±0.00 0.369±0.00 N/A N/A 0.126±0.00 0.068±0.00 0.060±0.00 0.144±0.00 N/A N/A N/A N/A N/A N/A
ENST00000466060 N/A N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 N/A N/A N/A 0.579±0.00 N/A
ENST00000467739 N/A N/A N/A N/A 0.539±0.00 0.515±0.41 N/A 1.020±0.00 0.589±0.00 0.771±0.00 0.311±0.00 0.588±0.15 0.604±0.09 N/A
ENST00000471517 N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 0.077±0.00 N/A
ENST00000475343 N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A 0.694±0.00 N/A N/A N/A N/A
ENST00000475646 N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A N/A 0.990±0.00 N/A N/A
ENST00000477793 0.548±0.00 N/A 0.520±0.00 1.853±1.21 0.845±0.22 0.605±0.05 0.065±0.00 0.119±0.00 0.444±0.00 1.717±0.00 N/A 1.094±0.82 0.538±0.13 54.610±0.00
ENST00000488473 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A 1.016±0.00 N/A N/A N/A
ENST00000489693 N/A N/A N/A 0.250±0.00 N/A N/A 0.385±0.00 N/A N/A N/A 0.187±0.00 0.412±0.00 N/A N/A
ENST00000492088 0.103±0.00 0.381±0.00 N/A 0.688±0.00 0.200±0.00 0.040±0.00 0.105±0.00 0.183±0.00 0.035±0.00 0.105±0.01 N/A 0.104±0.05 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0007338 TAS single fertilization
GO:0030154 IEA cell differentiation
GO:0032504 TAS multicellular organism reproduction
GO:0035036 TAS sperm-egg recognition
GO:0036128 IEA CatSper complex
GO:0097228 IEA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000049123 Catsperg2 catsper channel auxiliary subunit gamma 2 protein_coding Mus_musculus
ENSMUSG00000049676 Catsperg1 catsper channel auxiliary subunit gamma 1 protein_coding Mus_musculus

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