C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: catsper channel auxiliary subunit gamma 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049676 Catsperg1 10090 - 7:29181321-29214035 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047846 Catsperg1-201 29181532-29214033 protein_coding
  ENSMUST00000069861 Catsperg1-002 29196750-29211495 protein_coding
  ENSMUST00000085819 Catsperg1-003 29181534-29213991 retained_intron
  ENSMUST00000163445 Catsperg1-006 29189695-29202305 processed_transcript
  ENSMUST00000163614 Catsperg1-013 29197005-29210509 retained_intron
  ENSMUST00000163782 Catsperg1-011 29181585-29210695 nonsense_mediated_decay
  ENSMUST00000164653 Catsperg1-010 29185451-29214035 nonsense_mediated_decay
  ENSMUST00000165907 Catsperg1-004 29196913-29211084 retained_intron
  ENSMUST00000166419 Catsperg1-008 29181321-29213984 retained_intron
  ENSMUST00000166654 Catsperg1-005 29189698-29214003 retained_intron
  ENSMUST00000167064 Catsperg1-009 29208834-29214020 processed_transcript
  ENSMUST00000169143 Catsperg1-001 29181538-29213984 protein_coding
  ENSMUST00000171102 Catsperg1-012 29185452-29190200 processed_transcript
  ENSMUST00000172226 Catsperg1-007 29185316-29213982 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047846ENSMUST00000069861ENSMUST00000085819ENSMUST00000163445ENSMUST00000163614ENSMUST00000163782ENSMUST00000164653ENSMUST00000165907ENSMUST00000166419ENSMUST00000166654ENSMUST00000172226
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047846 N/A 0.131±0.01 N/A N/A N/A N/A N/A N/A 0.037±0.02 N/A 0.068±0.04 N/A N/A 39.212±0.79
ENSMUST00000069861 N/A 0.262±0.00 N/A N/A N/A 0.124±0.00 N/A N/A 0.064±0.00 N/A 0.029±0.01 0.340±0.00 N/A N/A
ENSMUST00000085819 0.198±0.00 0.325±0.00 N/A N/A N/A 0.075±0.02 N/A N/A 0.035±0.00 N/A 0.047±0.00 0.337±0.07 N/A N/A
ENSMUST00000163445 N/A N/A N/A N/A N/A 0.070±0.00 N/A 0.103±0.01 0.053±0.00 N/A N/A N/A N/A N/A
ENSMUST00000163614 N/A N/A N/A N/A N/A 0.176±0.00 N/A N/A N/A N/A 0.073±0.00 N/A N/A N/A
ENSMUST00000163782 0.401±0.08 N/A 0.404±0.00 N/A 0.501±0.12 0.194±0.05 0.214±0.00 0.075±0.00 0.107±0.06 0.604±0.00 0.050±0.01 0.574±0.21 0.261±0.06 N/A
ENSMUST00000164653 0.414±0.07 0.271±0.13 0.709±0.10 1.225±0.28 0.399±0.00 0.084±0.01 0.101±0.00 0.180±0.10 0.121±0.04 0.657±0.14 0.070±0.01 0.593±0.20 0.399±0.06 N/A
ENSMUST00000165907 0.892±0.10 0.249±0.00 N/A 0.987±0.00 N/A 0.138±0.00 N/A N/A 0.035±0.00 N/A 0.078±0.03 0.418±0.15 0.431±0.07 N/A
ENSMUST00000166419 N/A 0.169±0.00 0.245±0.00 0.345±0.04 N/A 0.074±0.01 N/A 0.058±0.02 0.058±0.04 N/A 0.026±0.00 0.268±0.13 0.234±0.02 52.198±2.92
ENSMUST00000166654 0.356±0.06 0.229±0.03 0.369±0.00 0.790±0.07 N/A N/A 0.053±0.00 0.068±0.00 N/A N/A 0.065±0.00 0.427±0.23 0.168±0.02 N/A
ENSMUST00000172226 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0036128 IEA CatSper complex
GO:0097228 IEA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099338 CATSPERG catsper channel auxiliary subunit gamma protein_coding Homo_sapiens

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