C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: purinergic receptor P2X, ligand-gated ion channel, 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000099957 P2RX6 9606 + 22:21009808-21028830 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000401443 P2RX6-003 21015170-21027198 protein_coding
  ENST00000413302 P2RX6-001 21015027-21028830 protein_coding
  ENST00000422210 P2RX6-005 21015190-21028013 nonsense_mediated_decay
  ENST00000432930 P2RX6-004 21015187-21028008 nonsense_mediated_decay
  ENST00000442475 P2RX6-002 21015153-21028008 nonsense_mediated_decay
  ENST00000452228 P2RX6-007 21015183-21023152 nonsense_mediated_decay
  ENST00000469722 P2RX6-006 21015175-21018791 retained_intron
  ENST00000487342 P2RX6-008 21023349-21026597 retained_intron
  ENST00000591411 P2RX6-009 21009808-21017942 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyMuscleENST00000401443ENST00000413302ENST00000432930ENST00000442475
Transcript ID Bladder Brain Breast Kidney Muscle
ENST00000401443 N/A N/A N/A 0.722±0.00 N/A
ENST00000413302 0.102±0.00 N/A N/A N/A N/A
ENST00000432930 N/A 1.591±0.00 N/A N/A N/A
ENST00000442475 N/A 3.909±0.00 6.759±0.00 N/A 4.981±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TB CIL_0002TB_0001 CGP 22:21009808-21032840

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001614 NAS:IEA purinergic nucleotide receptor activity
GO:0004888 TAS transmembrane signaling receptor activity
GO:0004931 NAS extracellular ATP-gated cation channel activity
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0005524 NAS:IEA ATP binding
GO:0005639 IBA integral component of nuclear inner membrane
GO:0005737 IDA cytoplasm
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0006811 IEA ion transport
GO:0006812 IBA cation transport
GO:0006936 TAS muscle contraction
GO:0007165 TAS signal transduction
GO:0014069 IEA postsynaptic density
GO:0015267 TAS channel activity
GO:0016020 IEA membrane
GO:0030054 IDA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0035590 IEA purinergic nucleotide receptor signaling pathway
GO:0042802 IPI identical protein binding
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0051260 IPI protein homooligomerization
GO:0051291 IEA protein heterooligomerization
GO:0055085 TAS transmembrane transport
GO:0098655 NAS cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022758 P2rx6 purinergic receptor P2X, ligand-gated ion channel, 6 protein_coding Mus_musculus

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