C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lectin, galactoside-binding, soluble, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100097 LGALS1 9606 + 22:37675608-37679806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000215909 LGALS1-001 37675608-37679806 protein_coding
  ENST00000425542 LGALS1-004 37675657-37679802 nonsense_mediated_decay
  ENST00000454173 LGALS1-005 37675688-37679640 nonsense_mediated_decay
  ENST00000464120 LGALS1-007 37675652-37677228 retained_intron
  ENST00000472321 LGALS1-006 37676999-37679802 retained_intron
  ENST00000480207 LGALS1-002 37675682-37677596 processed_transcript
  ENST00000489315 LGALS1-003 37676125-37679802 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215909ENST00000454173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215909 528.066±0.00 252.587±0.00 19.057±0.00 122.402±27.51 758.487±510.06 385.037±227.98 240.988±36.11 107.045±7.67 159.443±101.27 344.303±215.86 395.149±181.93 452.709±397.76 608.387±277.41 213.112±165.83
ENST00000454173 N/A N/A N/A 24.278±0.00 N/A 148.307±0.00 N/A 40.702±0.00 18.171±0.00 147.307±0.00 74.610±0.00 N/A N/A 10.883±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040C CIL_00040C_0001 CGP 22:37675608-37693478

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001948 IEA glycoprotein binding
GO:0002317 IEA plasma cell differentiation
GO:0004871 IMP signal transducer activity
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005737 TAS cytoplasm
GO:0006915 IEA apoptotic process
GO:0007165 IMP signal transduction
GO:0009986 IEA cell surface
GO:0010812 IEA negative regulation of cell-substrate adhesion
GO:0010977 IEA negative regulation of neuron projection development
GO:0016936 IEA galactoside binding
GO:0030246 IEA carbohydrate binding
GO:0030395 IEA lactose binding
GO:0031012 IDA extracellular matrix
GO:0031295 IEA T cell costimulation
GO:0033555 IEA multicellular organismal response to stress
GO:0034120 IEA positive regulation of erythrocyte aggregation
GO:0042493 IEA response to drug
GO:0042803 IEA protein homodimerization activity
GO:0042981 TAS regulation of apoptotic process
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043236 IEA laminin binding
GO:0044822 IDA poly(A) RNA binding
GO:0045445 IEA myoblast differentiation
GO:0048678 IEA response to axon injury
GO:0070062 IDA extracellular vesicular exosome
GO:0071333 IEA cellular response to glucose stimulus
GO:0071407 IEA cellular response to organic cyclic compound

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038153 lgals2b lectin, galactoside-binding, soluble, 2b protein_coding Danio_rerio
ENSDARG00000054942 lgals2a lectin, galactoside-binding, soluble, 2a protein_coding Danio_rerio
ENSDARG00000088711 lgals1l1 lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 protein_coding Danio_rerio
ENSMUSG00000068220 Lgals1 lectin, galactose binding, soluble 1 protein_coding Mus_musculus

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