C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, galactoside-binding, soluble, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000215909 LGALS1-001 ENSG00000100097 9606 + 22:37675608-37679806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000215909
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000215909 528.066±0.00 252.587±0.00 19.057±0.00 122.402±27.51 758.487±510.06 385.037±227.98 240.988±36.11 107.045±7.67 159.443±101.27 344.303±215.86 395.149±181.93 452.709±397.76 608.387±277.41 213.112±165.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040C CIL_00040C_0001 CGP 22:37675608-37693478

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001948 IEA glycoprotein binding
GO:0002317 IEA plasma cell differentiation
GO:0004871 IMP signal transducer activity
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IDA extracellular space
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005737 TAS cytoplasm
GO:0006915 IEA apoptotic process
GO:0007165 IMP signal transduction
GO:0009986 IEA cell surface
GO:0010812 IEA negative regulation of cell-substrate adhesion
GO:0010977 IEA negative regulation of neuron projection development
GO:0016936 IEA galactoside binding
GO:0030246 IEA carbohydrate binding
GO:0030395 IEA lactose binding
GO:0031012 IDA extracellular matrix
GO:0031295 IEA T cell costimulation
GO:0033555 IEA multicellular organismal response to stress
GO:0034120 IEA positive regulation of erythrocyte aggregation
GO:0042493 IEA response to drug
GO:0042803 IEA protein homodimerization activity
GO:0042981 TAS regulation of apoptotic process
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043236 IEA laminin binding
GO:0044822 IDA poly(A) RNA binding
GO:0045445 IEA myoblast differentiation
GO:0048678 IEA response to axon injury
GO:0070062 IDA extracellular vesicular exosome
GO:0071333 IEA cellular response to glucose stimulus
GO:0071407 IEA cellular response to organic cyclic compound

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089377 Lgals1-201 protein_coding Mus_musculus 0 525

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