C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 5 (sodium/glucose cotransporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100170 SLC5A1 9606 + 22:32043032-32113029 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266088 SLC5A1-001 32043032-32113029 protein_coding
  ENST00000477969 SLC5A1-002 32084849-32102207 retained_intron
  ENST00000486394 SLC5A1-003 32083051-32086326 retained_intron
  ENST00000543737 SLC5A1-201 32059170-32113002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000266088ENST00000477969ENST00000543737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000266088 N/A N/A 0.591±0.00 N/A 1.602±0.00 0.348±0.00 N/A 0.225±0.08 0.630±0.00 0.446±0.11 1.552±1.65 N/A 0.554±0.01
ENST00000477969 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543737 0.006±0.00 0.005±0.00 N/A 0.047±0.00 N/A 0.172±0.06 28.693±24.54 N/A 0.361±0.00 0.244±0.13 0.852±0.00 0.041±0.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EV CIL_0006EV_0002 CGP 22:31944461-32113029

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001656 IEA metanephros development
GO:0005215 IEA transporter activity
GO:0005355 IEA glucose transmembrane transporter activity
GO:0005412 IDA glucose:sodium symporter activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005903 IEA brush border
GO:0005911 IEA cell-cell junction
GO:0005975 TAS carbohydrate metabolic process
GO:0006810 IEA transport
GO:0006814 IEA sodium ion transport
GO:0008645 TAS hexose transport
GO:0015758 IMP glucose transport
GO:0016020 IEA membrane
GO:0016324 IEA apical plasma membrane
GO:0031526 IEA brush border membrane
GO:0044281 TAS small molecule metabolic process
GO:0050892 IEA intestinal absorption
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013871 slc5a1 solute carrier family 5 (sodium/glucose cotransporter), member 1 protein_coding Danio_rerio
ENSMUSG00000011034 Slc5a1 solute carrier family 5 (sodium/glucose cotransporter), member 1 protein_coding Mus_musculus

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