C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (sodium/glucose cotransporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000266088 SLC5A1-001 ENSG00000100170 9606 + 22:32043032-32113029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryTestisENST00000266088
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary Testis
ENST00000266088 0.591±0.00 1.602±0.00 0.348±0.00 0.225±0.08 0.630±0.00 0.446±0.11 1.552±1.65 0.554±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EV CIL_0006EV_0002 CGP 22:31944461-32113029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001656 IEA metanephros development
GO:0005215 IEA transporter activity
GO:0005355 IEA glucose transmembrane transporter activity
GO:0005412 IDA glucose:sodium symporter activity
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005903 IEA brush border
GO:0005911 IEA cell-cell junction
GO:0005975 TAS carbohydrate metabolic process
GO:0006810 IEA transport
GO:0006814 IEA sodium ion transport
GO:0008645 TAS hexose transport
GO:0015758 IMP glucose transport
GO:0016020 IEA membrane
GO:0016324 IEA apical plasma membrane
GO:0031526 IEA brush border membrane
GO:0044281 TAS small molecule metabolic process
GO:0050892 IEA intestinal absorption
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000011178 Slc5a1-001 protein_coding Mus_musculus 0 2165
ENSMUST00000120757 Slc5a4b-001 protein_coding Mus_musculus 0 821
ENSDART00000080449 slc5a1-001 protein_coding Danio_rerio 0 754
ENSMUST00000020450 Slc5a4a-201 protein_coding Mus_musculus 0 736

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