C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chibby homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100211 CBY1 9606 + 22:38656636-38673854 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216029 CBY1-001 38656655-38673854 protein_coding
  ENST00000396811 CBY1-002 38656651-38673846 protein_coding
  ENST00000411557 CBY1-003 38656640-38670989 protein_coding
  ENST00000416285 CBY1-005 38656676-38671188 protein_coding
  ENST00000467118 CBY1-008 38667896-38670945 retained_intron
  ENST00000475924 CBY1-004 38656636-38668467 retained_intron
  ENST00000485501 CBY1-009 38656636-38671235 retained_intron
  ENST00000489847 CBY1-007 38656688-38673413 retained_intron
  ENST00000492537 CBY1-010 38656671-38671309 retained_intron
  ENST00000492576 CBY1-006 38656676-38671136 retained_intron
  ENST00000619293 CBY1-201 38665595-38673844 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216029ENST00000396811ENST00000416285ENST00000489847ENST00000492537ENST00000619293
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216029 7.804±0.00 9.256±0.00 0.625±0.00 4.474±3.39 7.562±7.04 25.506±0.00 13.339±0.00 23.404±0.00 2.926±0.97 14.330±0.00 4.811±4.55 14.970±3.47 24.378±6.36 25.440±0.69
ENST00000396811 1.572±0.00 2.068±0.00 N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A 4.454±1.58 N/A
ENST00000416285 N/A N/A 0.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489847 N/A N/A 0.402±0.00 N/A N/A N/A N/A 0.506±0.00 N/A N/A N/A 2.161±0.00 6.709±0.00 N/A
ENST00000492537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.911±0.00 1.826±0.00 N/A N/A
ENST00000619293 N/A N/A N/A 2.724±0.00 N/A 1.668±0.00 N/A 0.834±0.00 N/A 0.746±0.00 N/A 4.400±0.00 6.439±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DM CIL_0005DM_0001 CGP 22:38578120-38673854
CIL_0005DN CIL_0005DN_0001 CGP 22:38656636-38685421

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005802 IDA trans-Golgi network
GO:0008013 IDA beta-catenin binding
GO:0008104 IMP protein localization
GO:0030178 IDA negative regulation of Wnt signaling pathway
GO:0036064 IEA ciliary basal body
GO:0042384 IEA cilium assembly
GO:0042802 IPI identical protein binding
GO:0045444 ISS fat cell differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0055007 ISS cardiac muscle cell differentiation
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077409 cby1 chibby homolog 1 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000022428 Cby1 chibby homolog 1 (Drosophila) protein_coding Mus_musculus

Loading