C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005DM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000184949-ENSG00000100211 CGP 9606 22:38578120-38673854
GeneTranscriptPositionBiotype
ENSG00000100211 (CBY1)
chibby homolog 1 (Drosophila) 		ENST00000216029 (CBY1-001) 38656655-38673854 protein_coding
ENST00000396811 (CBY1-002) 38656651-38673846 protein_coding
ENST00000411557 (CBY1-003) 38656640-38670989 protein_coding
ENST00000416285 (CBY1-005) 38656676-38671188 protein_coding
ENST00000467118 (CBY1-008) 38667896-38670945 retained_intron
ENST00000475924 (CBY1-004) 38656636-38668467 retained_intron
ENST00000485501 (CBY1-009) 38656636-38671235 retained_intron
ENST00000489847 (CBY1-007) 38656688-38673413 retained_intron
ENST00000492537 (CBY1-010) 38656671-38671309 retained_intron
ENST00000492576 (CBY1-006) 38656676-38671136 retained_intron
ENST00000619293 (CBY1-201) 38665595-38673844 protein_coding
ENSG00000184949 (FAM227A)
family with sequence similarity 227, member A 		ENST00000355830 (FAM227A-001) 38582169-38656303 protein_coding
ENST00000424706 (FAM227A-003) 38636557-38656278 processed_transcript
ENST00000484582 (FAM227A-002) 38638772-38656281 retained_intron
ENST00000490082 (FAM227A-004) 38649945-38656362 retained_intron
ENST00000535113 (FAM227A-201) 38578120-38656629 protein_coding
ENST00000540952 (FAM227A-009) 38586024-38656629 processed_transcript
ENST00000541689 (FAM227A-012) 38597207-38636551 processed_transcript
ENST00000543295 (FAM227A-010) 38620216-38629002 processed_transcript
ENST00000543828 (FAM227A-005) 38582169-38586145 processed_transcript
ENST00000544346 (FAM227A-006) 38591434-38656303 processed_transcript
ENST00000608409 (FAM227A-011) 38636546-38653853 processed_transcript
ENSG00000230912 (RP3-508I15.10)
 ENST00000423346 (RP3-508I15.10-001) 38666508-38668750 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0005DM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042564-ENSMUSG00000022428 CGP 10090 15:79609576-79667660
GeneTranscriptPositionBiotype
ENSMUSG00000022428 (Cby1)
chibby homolog 1 (Drosophila) 		ENSMUST00000023064 (Cby1-201) 79659227-79667660 protein_coding
ENSMUSG00000042564 (Fam227a)
family with sequence similarity 227, member A 		ENSMUST00000046816 (Fam227a-003) 79635305-79658956 retained_intron
ENSMUST00000109646 (Fam227a-201) 79612371-79658749 protein_coding
ENSMUST00000109648 (Fam227a-202) 79609576-79658956 protein_coding
ENSMUST00000187519 (Fam227a-002) 79612317-79658793 protein_coding
ENSMUST00000191401 (Fam227a-001) 79612371-79658793 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DM_0001ENSG00000100211ENST00000216029ENST00000396811ENST00000411557ENST00000416285ENST00000467118ENST00000475924ENST00000485501ENST00000489847ENST00000492537ENST00000492576ENST00000619293ENSG00000184949ENST00000355830ENST00000424706ENST00000484582ENST00000490082ENST00000535113ENST00000540952ENST00000541689ENST00000543295ENST00000543828ENST00000544346ENST00000608409ENSG00000230912ENST00000423346CIL_0005DM_0002ENSMUSG00000022428ENSMUST00000023064ENSMUSG00000042564ENSMUST00000046816ENSMUST00000109646ENSMUST00000109648ENSMUST00000187519ENSMUST00000191401
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DM_0001ENSG00000100211ENST00000216029ENST00000396811ENST00000416285ENST00000489847ENST00000492537ENST00000619293ENSG00000184949ENST00000355830ENST00000484582ENST00000490082ENST00000535113ENST00000540952ENST00000541689ENST00000543295ENST00000544346ENST00000608409ENSG00000230912ENST00000423346CIL_0005DM_0002ENSMUSG00000022428ENSMUST00000023064ENSMUSG00000042564ENSMUST00000046816ENSMUST00000109646ENSMUST00000109648ENSMUST00000187519ENSMUST00000191401
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100211 ENST00000216029 7.804±0.00 9.256±0.00 0.625±0.00 4.474±3.39 7.562±7.04 25.506±0.00 13.339±0.00 23.404±0.00 2.926±0.97 14.330±0.00 4.811±4.55 14.970±3.47 24.378±6.36 25.440±0.69
ENST00000396811 1.572±0.00 2.068±0.00 N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A 4.454±1.58 N/A
ENST00000411557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416285 N/A N/A 0.465±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489847 N/A N/A 0.402±0.00 N/A N/A N/A N/A 0.506±0.00 N/A N/A N/A 2.161±0.00 6.709±0.00 N/A
ENST00000492537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.911±0.00 1.826±0.00 N/A N/A
ENST00000492576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619293 N/A N/A N/A 2.724±0.00 N/A 1.668±0.00 N/A 0.834±0.00 N/A 0.746±0.00 N/A 4.400±0.00 6.439±0.00 N/A
ENSG00000184949 ENST00000355830 N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A
ENST00000490082 N/A N/A 0.980±0.00 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 0.469±0.00 N/A N/A
ENST00000535113 0.079±0.00 0.199±0.00 N/A N/A N/A 0.044±0.02 0.049±0.04 0.030±0.00 0.030±0.01 N/A 0.019±0.00 N/A 0.016±0.00 N/A
ENST00000540952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.586±0.00
ENST00000541689 N/A N/A 0.697±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A
ENST00000543295 N/A N/A N/A N/A 1.384±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544346 N/A N/A N/A N/A 0.380±0.00 N/A N/A N/A N/A 0.290±0.00 N/A 0.371±0.00 N/A 6.239±0.00
ENST00000608409 N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 1.471±0.00 N/A N/A 0.067±0.00 N/A
ENSG00000230912 ENST00000423346 0.062±0.00 0.991±0.00 0.987±0.00 0.445±0.00 0.154±0.09 0.169±0.00 0.087±0.00 0.091±0.00 0.105±0.00 0.801±0.70 N/A 0.149±0.05 N/A 0.076±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022428 ENSMUST00000023064 6.272±1.45 6.461±3.27 7.384±0.12 19.811±8.50 2.762±1.25 5.447±1.88 4.885±0.34 7.179±0.83 3.398±1.68 7.990±2.39 7.764±0.79 8.457±5.52 6.514±2.93 36.684±9.03
ENSMUSG00000042564 ENSMUST00000046816 N/A 0.088±0.04 N/A N/A 0.088±0.01 0.083±0.04 0.058±0.00 0.145±0.07 0.048±0.02 N/A 0.033±0.01 0.187±0.07 N/A N/A
ENSMUST00000109646 N/A 0.091±0.01 N/A 2.525±0.00 0.189±0.00 0.128±0.00 0.166±0.03 0.150±0.01 0.079±0.03 0.465±0.00 0.094±0.04 1.009±0.82 0.246±0.15 6.596±6.21
ENSMUST00000109648 N/A 0.129±0.03 N/A N/A 0.113±0.04 0.098±0.03 0.057±0.02 0.320±0.00 0.059±0.04 N/A 0.051±0.01 0.289±0.15 0.032±0.00 2.319±0.14
ENSMUST00000187519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.29 N/A 6.174±2.75
ENSMUST00000191401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A

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