C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Josephin domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100221 JOSD1 9606 - 22:38685543-38701556 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216039 JOSD1-001 38685543-38700667 protein_coding
  ENST00000412832 JOSD1-010 38689296-38700940 protein_coding
  ENST00000417712 JOSD1-002 38699801-38701556 protein_coding
  ENST00000427389 JOSD1-011 38689074-38701030 protein_coding
  ENST00000456626 JOSD1-003 38699803-38700930 protein_coding
  ENST00000462610 JOSD1-004 38700161-38701032 processed_transcript
  ENST00000482442 JOSD1-009 38687924-38689323 retained_intron
  ENST00000490169 JOSD1-005 38700276-38701418 processed_transcript
  ENST00000493939 JOSD1-006 38700282-38700942 processed_transcript
  ENST00000545590 JOSD1-012 38687718-38699970 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216039ENST00000412832ENST00000456626
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216039 8.680±0.00 5.374±0.00 4.104±0.00 2.157±1.01 2.429±1.21 1.358±0.00 2.486±0.00 4.321±0.00 1.772±1.27 5.566±4.06 4.107±0.00 3.909±0.00
ENST00000412832 N/A N/A N/A 4.790±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456626 N/A N/A N/A N/A N/A N/A N/A N/A 0.855±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DE CIL_0005DE_0001 CGP 22:38681948-38701556
CIL_0001ZY CIL_0001ZY_0001 CGP 22:38685543-38738299

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006508 IEA proteolysis
GO:0008242 IEA omega peptidase activity
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071548 josd1 Josephin domain containing 1 protein_coding Danio_rerio
ENSDARG00000091305 josd1 Josephin domain containing 1 protein_coding Danio_rerio
ENSMUSG00000022426 Josd1 Josephin domain containing 1 protein_coding Mus_musculus

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