C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ZY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100221-ENSG00000100226 CGP 9606 22:38685543-38738299
GeneTranscriptPositionBiotype
ENSG00000100221 (JOSD1)
Josephin domain containing 1 		ENST00000216039 (JOSD1-001) 38685543-38700667 protein_coding
ENST00000412832 (JOSD1-010) 38689296-38700940 protein_coding
ENST00000417712 (JOSD1-002) 38699801-38701556 protein_coding
ENST00000427389 (JOSD1-011) 38689074-38701030 protein_coding
ENST00000456626 (JOSD1-003) 38699803-38700930 protein_coding
ENST00000462610 (JOSD1-004) 38700161-38701032 processed_transcript
ENST00000482442 (JOSD1-009) 38687924-38689323 retained_intron
ENST00000490169 (JOSD1-005) 38700276-38701418 processed_transcript
ENST00000493939 (JOSD1-006) 38700282-38700942 processed_transcript
ENST00000545590 (JOSD1-012) 38687718-38699970 protein_coding
ENSG00000100226 (GTPBP1)
GTP binding protein 1 		ENST00000216044 (GTPBP1-001) 38705723-38733587 protein_coding
ENST00000418601 (GTPBP1-004) 38705949-38721822 nonsense_mediated_decay
ENST00000458073 (GTPBP1-010) 38726306-38738299 protein_coding
ENST00000460605 (GTPBP1-006) 38725176-38726428 processed_transcript
ENST00000461428 (GTPBP1-015) 38706118-38716240 retained_intron
ENST00000462332 (GTPBP1-002) 38728256-38732239 retained_intron
ENST00000470836 (GTPBP1-011) 38706520-38715962 protein_coding
ENST00000475959 (GTPBP1-007) 38725807-38726388 retained_intron
ENST00000484657 (GTPBP1-003) 38705742-38716867 protein_coding
ENST00000484971 (GTPBP1-016) 38730613-38736184 nonsense_mediated_decay
ENST00000487538 (GTPBP1-017) 38734324-38736175 nonsense_mediated_decay
ENST00000488787 (GTPBP1-005) 38706511-38716669 protein_coding
ENST00000489527 (GTPBP1-018) 38734325-38738295 protein_coding
ENSG00000100242 (SUN2)
Sad1 and UNC84 domain containing 2 		ENST00000405018 (SUN2-002) 38734736-38755999 protein_coding
ENST00000405510 (SUN2-001) 38734725-38755528 protein_coding
ENST00000406622 (SUN2-017) 38735909-38794143 protein_coding
ENST00000417332 (SUN2-010) 38751007-38754775 protein_coding
ENST00000420859 (SUN2-008) 38750225-38754951 protein_coding
ENST00000430185 (SUN2-011) 38745075-38750314 protein_coding
ENST00000433561 (SUN2-003) 38750992-38755634 protein_coding
ENST00000438058 (SUN2-009) 38745687-38756000 protein_coding
ENST00000439339 (SUN2-006) 38751020-38755429 protein_coding
ENST00000452294 (SUN2-005) 38750888-38754982 protein_coding
ENST00000455125 (SUN2-015) 38737760-38739423 protein_coding
ENST00000456894 (SUN2-004) 38748713-38754993 protein_coding
ENST00000464202 (SUN2-012) 38740292-38742578 retained_intron
ENST00000469086 (SUN2-013) 38739341-38742481 retained_intron
ENST00000470642 (SUN2-014) 38738238-38739247 retained_intron
ENST00000477262 (SUN2-019) 38738926-38742438 retained_intron
ENST00000480307 (SUN2-018) 38749766-38751441 retained_intron
ENST00000494273 (SUN2-007) 38750898-38754943 retained_intron
ENSG00000229598 (PRDX3P1)
peroxiredoxin 3 pseudogene 1 		ENST00000418695 (PRDX3P1-001) 38722743-38723505 processed_pseudogene
ENSG00000273096 (RP3-508I15.20)
 ENST00000609428 (RP3-508I15.20-001) 38736610-38736792 sense_intronic
CIL_0001ZY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022426-ENSMUSG00000042535 CGP 10090 15:79674250-79721478
GeneTranscriptPositionBiotype
ENSMUSG00000022426 (Josd1)
Josephin domain containing 1 		ENSMUST00000023061 (Josd1-201) 79674250-79687872 protein_coding
ENSMUSG00000042535 (Gtpbp1)
GTP binding protein 1 		ENSMUST00000046463 (Gtpbp1-201) 79690895-79721478 protein_coding
ENSMUSG00000064409 (n-R5s40)
nuclear encoded rRNA 5S 40 		ENSMUST00000082475 (n-R5s40-201) 79692502-79692625 rRNA
ENSMUSG00000097128 (Gm26884)
predicted gene, 26884 		ENSMUST00000181207 (Gm26884-201) 79689140-79692385 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZY_0001ENSG00000100221ENST00000216039ENST00000412832ENST00000456626ENSG00000100226ENST00000216044ENSG00000100242ENST00000405018ENSG00000229598ENST00000418695ENSG00000273096ENST00000609428CIL_0001ZY_0002ENSMUSG00000022426ENSMUST00000023061ENSMUSG00000042535ENSMUST00000046463ENSMUSG00000064409ENSMUST00000082475ENSMUSG00000097128ENSMUST00000181207
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100221 ENST00000216039 8.680±0.00 N/A N/A 5.374±0.00 4.104±0.00 2.157±1.01 2.429±1.21 1.358±0.00 2.486±0.00 4.321±0.00 1.772±1.27 5.566±4.06 4.107±0.00 3.909±0.00
ENST00000412832 N/A N/A N/A N/A N/A 4.790±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.855±0.00 N/A N/A N/A
ENST00000462610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100226 ENST00000216044 19.850±0.00 14.061±0.00 N/A 12.231±9.86 8.371±5.18 9.249±6.18 1.161±0.00 1.999±0.00 N/A 19.098±16.82 13.506±11.56 13.910±6.91 13.570±2.87 16.315±0.00
ENST00000418601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100242 ENST00000405018 31.187±0.00 N/A 2.104±0.00 N/A 78.669±0.00 48.188±45.95 16.180±0.00 N/A 18.312±0.00 18.803±15.74 62.672±0.00 13.436±7.59 N/A 18.817±0.00
ENST00000405510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229598 ENST00000418695 0.271±0.00 0.334±0.00 0.687±0.00 0.288±0.00 1.617±1.24 0.993±0.77 0.071±0.02 0.110±0.00 1.454±1.44 1.521±0.36 0.457±0.00 1.437±1.80 0.134±0.07 0.433±0.23
ENSG00000273096 ENST00000609428 0.425±0.00 1.016±0.00 N/A 0.237±0.00 0.232±0.00 0.427±0.00 0.302±0.00 0.111±0.00 0.970±0.00 0.533±0.00 N/A 1.565±0.00 N/A 0.316±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022426 ENSMUST00000023061 15.636±3.08 26.184±4.72 15.152±2.42 11.965±2.75 22.011±3.02 18.378±2.75 8.782±0.32 8.659±2.21 16.330±4.67 13.029±3.05 6.375±0.47 27.519±9.63 10.597±4.04 11.290±4.51
ENSMUSG00000042535 ENSMUST00000046463 13.626±3.12 15.889±0.71 10.990±1.86 15.293±3.78 19.032±3.47 17.606±1.30 9.509±0.73 12.817±1.16 11.701±7.93 15.915±0.60 9.045±0.45 19.822±3.31 6.375±2.08 9.539±3.61
ENSMUSG00000064409 ENSMUST00000082475 N/A N/A 14.310±0.00 6.892±0.00 N/A N/A N/A N/A N/A N/A N/A 7.153±0.00 15.554±0.00 N/A
ENSMUSG00000097128 ENSMUST00000181207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.082±0.06

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