C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 6, regulatory subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100239 PPP6R2 9606 + 22:50343304-50445090 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216061 PPP6R2-004 50372072-50444391 protein_coding
  ENST00000359139 PPP6R2-001 50343304-50445090 protein_coding
  ENST00000395741 PPP6R2-002 50343323-50444374 protein_coding
  ENST00000395744 PPP6R2-003 50343331-50444374 protein_coding
  ENST00000401672 PPP6R2-007 50419442-50444390 protein_coding
  ENST00000427222 PPP6R2-005 50423605-50444371 protein_coding
  ENST00000470046 PPP6R2-006 50443087-50444378 retained_intron
  ENST00000473283 PPP6R2-008 50439753-50441074 retained_intron
  ENST00000612753 PPP6R2-201 50343317-50445090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359139ENST00000395744ENST00000401672ENST00000612753
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359139 N/A N/A 0.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395744 6.268±0.00 N/A 1.399±0.00 3.814±0.00 3.460±0.00 2.495±0.00 9.328±0.00 2.456±0.00 5.593±0.00 3.355±2.09 1.810±0.00 3.930±2.46 4.297±0.00 31.125±12.44
ENST00000401672 N/A N/A N/A N/A N/A N/A N/A N/A 7.826±0.00 N/A N/A N/A 7.708±0.59 N/A
ENST00000612753 6.177±0.00 10.879±0.00 1.068±0.00 7.103±4.03 8.367±0.00 5.303±3.24 3.221±2.07 8.487±5.77 6.531±0.00 3.662±2.29 9.227±7.88 9.729±3.71 5.221±0.70 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V2 CIL_0000V2_0002 CGP 22:50309030-50445090
CIL_00024L CIL_00024L_0001 CGP 22:50343304-50475025

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045540 ppp6r2a protein phosphatase 6, regulatory subunit 2a protein_coding Danio_rerio
ENSMUSG00000036561 Ppp6r2 protein phosphatase 6, regulatory subunit 2 protein_coding Mus_musculus

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