C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000V2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000011605-ENSDARG00000045540 CGP 7955 4:19005546-19033176
GeneTranscriptPositionBiotype
ENSDARG00000011605 (dennd6b)
DENN/MADD domain containing 6B 		ENSDART00000024647 (dennd6b-001) 19005546-19016039 protein_coding
ENSDARG00000045540 (ppp6r2a)
protein phosphatase 6, regulatory subunit 2a 		ENSDART00000066961 (ppp6r2a-001) 19016893-19033176 protein_coding
CIL_0000V2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205593-ENSG00000100239 CGP 9606 22:50309030-50445090
GeneTranscriptPositionBiotype
ENSG00000100241 (SBF1)
SET binding factor 1 		ENST00000348911 (SBF1-003) 50446806-50474942 protein_coding
ENST00000380817 (SBF1-001) 50445000-50475024 protein_coding
ENST00000390679 (SBF1-201) 50447142-50475025 protein_coding
ENST00000399627 (SBF1-008) 50466431-50474849 retained_intron
ENST00000418590 (SBF1-005) 50446810-50455377 protein_coding
ENST00000470434 (SBF1-004) 50446826-50455989 retained_intron
ENST00000473724 (SBF1-006) 50447083-50447609 retained_intron
ENST00000476293 (SBF1-007) 50456589-50457347 processed_transcript
ENST00000477234 (SBF1-009) 50466196-50467355 retained_intron
ENSG00000205593 (DENND6B)
DENN/MADD domain containing 6B 		ENST00000413817 (DENND6B-001) 50309030-50327060 protein_coding
ENST00000433760 (DENND6B-004) 50314822-50319095 protein_coding
ENST00000460087 (DENND6B-003) 50316654-50318970 retained_intron
ENST00000471942 (DENND6B-005) 50314203-50318967 retained_intron
ENST00000495607 (DENND6B-002) 50311966-50326977 retained_intron
ENSG00000238604 (Y_RNA)
Y RNA 		ENST00000459259 (Y_RNA.1-841) 50398820-50398920 misc_RNA
ENSG00000242463 (RN7SL500P)
RNA, 7SL, cytoplasmic 500, pseudogene 		ENST00000470627 (RN7SL500P-201) 50371210-50371496 misc_RNA
ENSG00000279182 (XX-C00717C00720L.1)
 ENST00000623684 (XX-C00717C00720L.1-001) 50316035-50317025 antisense
CIL_0000V2_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015377-ENSMUSG00000036561 CGP 10090 15:89182217-89286261
GeneTranscriptPositionBiotype
ENSMUSG00000015377 (Dennd6b)
DENN/MADD domain containing 6B 		ENSMUST00000078953 (Dennd6b-201) 89182217-89196474 protein_coding
ENSMUSG00000036561 (Ppp6r2)
protein phosphatase 6, regulatory subunit 2 		ENSMUST00000088788 (Ppp6r2-201) 89253035-89286261 protein_coding
ENSMUSG00000097578 (Gm26798)
predicted gene, 26798 		ENSMUST00000181384 (Gm26798-201) 89211559-89215012 lincRNA
ENSMUSG00000098663 (Mir6958)
microRNA 6958 		ENSMUST00000184207 (Mir6958-201) 89185465-89185537 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000V2_0001ENSDARG00000011605ENSDART00000024647ENSDARG00000045540ENSDART00000066961CIL_0000V2_0002ENSG00000100241ENST00000348911ENST00000380817ENST00000390679ENST00000399627ENST00000418590ENST00000470434ENST00000473724ENST00000476293ENST00000477234ENSG00000205593ENST00000413817ENST00000433760ENST00000460087ENST00000471942ENST00000495607ENSG00000238604ENST00000459259ENSG00000242463ENST00000470627ENSG00000279182ENST00000623684CIL_0000V2_0003ENSMUSG00000015377ENSMUST00000078953ENSMUSG00000036561ENSMUST00000088788ENSMUSG00000097578ENSMUST00000181384ENSMUSG00000098663ENSMUST00000184207
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000V2_0001ENSDARG00000011605ENSDART00000024647ENSDARG00000045540ENSDART00000066961CIL_0000V2_0002ENSG00000100241ENST00000348911ENST00000380817ENST00000390679ENST00000418590ENSG00000205593ENST00000413817ENST00000433760ENST00000460087ENST00000471942ENST00000495607ENSG00000238604ENST00000459259ENSG00000242463ENST00000470627ENSG00000279182ENST00000623684CIL_0000V2_0003ENSMUSG00000015377ENSMUST00000078953ENSMUSG00000036561ENSMUST00000088788ENSMUSG00000097578ENSMUST00000181384ENSMUSG00000098663ENSMUST00000184207
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011605 ENSDART00000024647 N/A N/A N/A 4.608±2.43 N/A N/A 2.376±0.84 2.085±0.43 0.210±0.00 N/A 0.399±0.00 N/A N/A N/A
ENSDARG00000045540 ENSDART00000066961 N/A N/A N/A N/A N/A N/A 1.801±0.00 4.732±3.04 0.252±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100241 ENST00000348911 4.338±0.00 7.417±0.00 N/A 8.163±0.00 5.139±2.38 N/A 5.200±0.00 N/A N/A 4.824±0.00 N/A 12.991±1.62 N/A 70.471±0.00
ENST00000380817 5.276±0.00 13.553±0.00 0.566±0.00 9.900±7.93 8.684±0.00 8.474±0.00 4.747±0.00 9.862±0.00 2.737±1.60 3.108±2.30 8.824±6.68 8.064±5.45 3.095±0.58 9.020±0.00
ENST00000390679 N/A N/A 1.534±0.00 8.101±3.11 1.890±0.00 1.688±0.00 1.730±0.00 N/A 1.859±0.00 N/A 4.268±0.00 4.405±1.11 6.501±2.59 60.448±0.00
ENST00000399627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.914±0.00
ENST00000470434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205593 ENST00000413817 N/A N/A 0.599±0.00 1.813±0.57 0.293±0.26 0.023±0.00 0.091±0.07 0.403±0.00 0.030±0.00 N/A N/A 1.427±0.00 0.027±0.00 N/A
ENST00000433760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.323±0.00 3.806±0.00
ENST00000460087 N/A N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000471942 N/A N/A N/A N/A 0.235±0.00 N/A N/A N/A N/A N/A N/A 1.422±0.00 0.480±0.29 N/A
ENST00000495607 0.516±0.00 2.787±0.00 N/A 2.665±2.16 0.790±0.75 1.055±0.00 0.268±0.00 1.335±0.00 0.242±0.03 8.960±0.00 0.424±0.00 2.257±1.62 0.409±0.19 6.416±1.07
ENSG00000238604 ENST00000459259 N/A 0.763±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242463 ENST00000470627 N/A 0.120±0.00 N/A N/A N/A 0.715±0.00 N/A N/A N/A N/A N/A 0.122±0.00 N/A N/A
ENSG00000279182 ENST00000623684 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.456±0.00 N/A 0.916±0.00 0.290±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015377 ENSMUST00000078953 2.588±0.21 2.824±0.45 4.548±0.76 21.261±10.54 2.849±1.06 2.888±0.83 2.712±0.29 1.792±0.56 1.363±0.37 2.552±0.73 2.424±0.60 3.607±0.36 1.050±0.44 10.703±1.24
ENSMUSG00000036561 ENSMUST00000088788 6.806±2.21 6.233±0.63 5.513±1.41 14.106±2.99 7.139±1.98 4.763±1.61 5.165±2.74 5.215±1.30 3.788±1.62 7.232±0.38 5.971±1.52 8.665±2.69 1.320±0.45 10.845±3.50
ENSMUSG00000097578 ENSMUST00000181384 1.657±0.77 3.866±0.18 0.415±0.00 1.107±0.70 4.027±1.89 2.902±0.70 N/A 1.353±0.33 1.209±0.42 3.236±0.67 N/A 3.738±2.04 0.282±0.11 1.337±0.23
ENSMUSG00000098663 ENSMUST00000184207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 93767.398±0.00 N/A N/A

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