C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GRB2-related adaptor protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100351 GRAP2 9606 + 22:39901082-39973721 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344138 GRAP2-001 39901082-39973721 protein_coding
  ENST00000407075 GRAP2-003 39946817-39971105 protein_coding
  ENST00000420971 GRAP2-004 39926591-39960175 protein_coding
  ENST00000460449 GRAP2-006 39969375-39971187 retained_intron
  ENST00000461082 GRAP2-002 39926649-39948481 retained_intron
  ENST00000478445 GRAP2-005 39926603-39966109 processed_transcript
  ENST00000481263 GRAP2-007 39966050-39968696 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344138ENST00000407075ENST00000460449
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344138 0.179±0.00 2.455±0.00 0.213±0.00 0.260±0.00 0.085±0.02 N/A 0.284±0.00 0.802±0.36 0.023±0.00 0.293±0.12 0.319±0.07 1.115±0.12
ENST00000407075 N/A N/A N/A N/A 0.109±0.00 0.222±0.00 N/A 1.444±0.00 N/A 0.489±0.00 0.272±0.02 1.846±0.00
ENST00000460449 N/A N/A N/A N/A N/A N/A 0.555±0.26 N/A N/A N/A 0.920±0.42 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057J CIL_00057J_0001 CGP 22:39743044-39973721
CIL_0007AX CIL_0007AX_0003 CGP 22:39901082-40043529

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005768 IDA endosome
GO:0005829 TAS cytosol
GO:0007265 TAS Ras protein signal transduction
GO:0007267 TAS cell-cell signaling
GO:0009967 TAS positive regulation of signal transduction
GO:0031295 TAS T cell costimulation
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0045087 TAS innate immune response
GO:0050852 TAS T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006468 grap2a GRB2-related adaptor protein 2a protein_coding Danio_rerio
ENSDARG00000074837 grap2b GRB2-related adaptor protein 2b protein_coding Danio_rerio
ENSMUSG00000042351 Grap2 GRB2-related adaptor protein 2 protein_coding Mus_musculus

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